RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TPMTP51580 245 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 NDUFA8P51970 172 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 BCAT1P54687 386 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 RAD23BP54727 409 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 YWHAGP61981 247 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP1-204ENST00000452143 PDE4CQ08493 712 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 GRIK2Q13002 908 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 ZNF394Q53GI3 561 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 RAB44Q7Z6P3 723 aaPredicted RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 DENND1CQ8IV53 801 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 NAXDQ8IW45 347 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 ANKRD52Q8NB46 1076 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 RBBP8NLQ8NC74 664 aaPredicted RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 OR2I1PQ8NGU4 316 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 ERLEC1Q96DZ1 483 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 SIPA1Q96FS4 1042 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 HEXIM2Q96MH2 286 aaKnown RBP11.4□□□□□ -0.58
USP1-204ENST00000452143 PCED1AQ9H1Q7 454 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 RAB20Q9NX57 234 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 ELOVL2Q9NXB9 296 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 MAPK8IP1Q9UQF2 711 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 IGSF10Q6WRI0 2623 aa11.4□□□□□ -0.58
USP1-204ENST00000452143 A0A1W2PQ27 194 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 A0A1W2PQ64 194 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 TIMM44O43615 452 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 CER1O95813 267 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 LATS1O95835 1130 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 APC2O95996 2303 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 ZNF883P0CG24 379 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 EPB41P11171 864 aaKnown RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 ACADMP11310 421 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 TKTL1P51854 596 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 COPAP53621 1224 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 FAM193AP78312 1265 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 ZNF234Q14588 700 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 PM20D1Q6GTS8 502 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 IL27RAQ6UWB1 636 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 SERPINA13PQ6UXR4 307 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 TMPRSS6Q8IU80 811 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 ZCCHC9Q8N567 271 aaKnown RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 KNL1Q8NG31 2342 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 DDI1Q8WTU0 396 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 ARID3AQ99856 593 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 GPR174Q9BXC1 333 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 CIPCQ9C0C6 399 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 FBRSQ9HAH7 460 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 STOML2Q9UJZ1 356 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 ATP6V1DQ9Y5K8 247 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 TP53BP1Q12888 1972 aaPredicted RBP11.39□□□□□ -0.59
USP1-204ENST00000452143 CABIN1Q9Y6J0 2220 aa11.39□□□□□ -0.59
USP1-204ENST00000452143 PTPRBP23467 1997 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 SLC12A8A0AV02 714 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 METTL12A8MUP2 240 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 KCNJ18B7U540 433 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 CETN3O15182 167 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 SLC16A3O15427 465 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 SH3BP5O60239 455 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 EPHX1P07099 455 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 HMBSP08397 361 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 HOXD9P28356 352 aaPredicted RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 YWHAEP62258 255 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 ARID5AQ03989 594 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 MPPE1Q53F39 396 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 BHLHA9Q7RTU4 235 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 GLRX5Q86SX6 157 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 CHCHD4Q8N4Q1 142 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 WFIKKN2Q8TEU8 576 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 ADAMTS14Q8WXS8 1223 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 SEMA4DQ92854 862 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 ULBP1Q9BZM6 244 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 LRRC4Q9HBW1 653 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 HESX1Q9UBX0 185 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 TSPAN16Q9UKR8 245 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 TMEM131Q92545 1883 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 NYNRINQ9P2P1 1898 aaKnown RBP11.38□□□□□ -0.59
USP1-204ENST00000452143 NUMA1Q14980 2115 aa11.38□□□□□ -0.59
USP1-204ENST00000452143 CELSR3Q9NYQ7 3312 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 BCAT2O15382 392 aaPredicted RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 SETSIPP0DME0 302 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 PYGBP11216 843 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 PRKCHP24723 683 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 MAOBP27338 520 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 HLA-FP30511 346 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 MATKP42679 507 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms