RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 OR8K1Q8NGG5 319 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 DDI1Q8WTU0 396 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 PIWIL1Q96J94 861 aaKnown RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 FCRL2Q96LA5 508 aaPredicted RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SELENOOQ9BVL4 669 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SLC2A11Q9BYW1 496 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 CHRDQ9H2X0 955 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 WDCPQ9H6R7 721 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 FBRSL1Q9HCM7 1045 aaKnown RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ARHGEF4Q9NR80 690 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 DDIT4Q9NX09 232 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 TMEM59LQ9UK28 342 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 NOTCH4Q99466 2003 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 SYNJ2BP-COX16A0A087WUM0 186 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 TYW5A2RUC4 315 aaKnown RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 SIGLEC16A6NMB1 481 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 CACNG3O60359 315 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 TSPAN3O60637 253 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 RTN2O75298 545 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 TULP3O75386 442 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 KAT7O95251 611 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 EGFP01133 1207 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 IGLV3-25P01717 112 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 FTLP02792 175 aaPredicted RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 GYPCP04921 128 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 PDGFRAP16234 1089 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 DESP17661 470 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 CXCL12P48061 93 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 DGKGP49619 791 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 SULT1E1P49888 294 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 CCR3P51677 355 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 PTPN5P54829 565 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 GSCP56915 257 aaPredicted RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 MRPS21P82921 87 aaKnown RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 PTP4A2Q12974 167 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 NME3Q13232 169 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 EIF4EBP2Q13542 120 aaPredicted RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 GAB4Q2WGN9 574 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 TDRD12Q587J7 1177 aaKnown RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 MPP7Q5T2T1 576 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 FYB2Q5VWT5 728 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 ZNF571Q7Z3V5 609 aaPredicted RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 VSTM4Q8IW00 320 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 MCOLN2Q8IZK6 566 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 KCNV2Q8TDN2 545 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 NT5C3BQ969T7 300 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 PGAP3Q96FM1 320 aaPredicted RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 NPY6RQ99463 290 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 SYT11Q9BT88 431 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 RBM12Q9NTZ6 932 aaKnown RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 SPTLC3Q9NUV7 552 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 DNAJC17Q9NVM6 304 aaKnown RBP9.22□□□□□ -0.93
COL8A1-203ENST00000452013 COX16Q9P0S2 106 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 FBXO4Q9UKT5 387 aa9.22□□□□□ -0.93
COL8A1-203ENST00000452013 GOLGA6L7A0A1B0GV03 622 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 FAM170AA1A519 330 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 TMCO5BA8MYB1 307 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 CHURC1-FNTBB4DL54 471 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 DDX3XO00571 662 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 TIMM44O43615 452 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 ENDOD1O94919 500 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 MOCS2O96007 188 aaPredicted RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 PENKP01210 267 aaPredicted RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 MYBL1P10243 752 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 SDC4P31431 198 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 HNRNPH3P31942 346 aaKnown RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 CXCR3P49682 368 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 NRLP54845 237 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 MTAPQ13126 283 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 ANGPT1Q15389 498 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 HSF5Q4G112 596 aaPredicted RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 BRMS1LQ5PSV4 323 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 PIK3R6Q5UE93 754 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 HGSNATQ68CP4 663 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 SDE2Q6IQ49 451 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 DNAJC24Q6P3W2 148 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 DCUN1D2Q6PH85 259 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 MON1BQ7L1V2 547 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 TRMT11Q7Z4G4 463 aaKnown RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 PHLDB2Q86SQ0 1253 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 C3orf20Q8ND61 904 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 RXFP2Q8WXD0 754 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 BHMTQ93088 406 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 TRIM11Q96F44 468 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 METTL5Q9NRN9 209 aaKnown RBP9.21□□□□□ -0.94
COL8A1-203ENST00000452013 PARVAQ9NVD7 372 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 PLK2Q9NYY3 685 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 ADAMTS1Q9UHI8 967 aa9.21□□□□□ -0.94
COL8A1-203ENST00000452013 C2CD4BA6NLJ0 364 aa9.2□□□□□ -0.94
COL8A1-203ENST00000452013 AKR1B15C9JRZ8 316 aaPredicted RBP9.2□□□□□ -0.94
COL8A1-203ENST00000452013 F5H5T6 163 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms