RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
AC004540.1-204ENST00000449537 SIX4Q9UIU6 781 aa13.25□□□□□ -0.29
AC004540.1-204ENST00000449537 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
AC004540.1-204ENST00000449537 CACNA1DQ01668 2161 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 CLDN5O00501 218 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 TRIM38O00635 465 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 PENKP01210 267 aaPredicted RBP13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 GALCP54803 685 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 NXPH1P58417 271 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 CLN3Q13286 438 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 C3orf38Q5JPI3 329 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 RBBP8NLQ8NC74 664 aaPredicted RBP13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 SGF29Q96ES7 293 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 FAM213AQ9BRX8 229 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 B3GNT5Q9BYG0 378 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 FBRSQ9HAH7 460 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 PLA2G4CQ9UP65 541 aa13.24□□□□□ -0.29
AC004540.1-204ENST00000449537 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 SPTBN1Q01082 2364 aaKnown RBP13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 WNT9AO14904 365 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 PLA2G4AP47712 749 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 IGFBP7Q16270 282 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 FNDC3BQ53EP0 1204 aaKnown RBP13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 HYIQ5T013 277 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 FYB2Q5VWT5 728 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 NCEH1Q6PIU2 408 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 NECAB1Q8N987 351 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 GOLGA1Q92805 767 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 P2RY11Q96G91 374 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 FAM84AQ96KN4 292 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 ATXN7L1Q9ULK2 861 aaPredicted RBP13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
AC004540.1-204ENST00000449537 FAM92AA1XBS5 289 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 LRRC72A6NJI9 287 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 CYP26A1O43174 497 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SDC3O75056 442 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 TMEM191BP0C7N4 346 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 CHKAP35790 457 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 PGFP49763 221 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 DUSP3P51452 185 aaPredicted RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 ZNF131P52739 623 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SLC5A3P53794 718 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 FOXK1P85037 733 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 IL17AQ16552 155 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 ISXQ2M1V0 245 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 TMEM215Q68D42 235 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 Q6ZNB5 142 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 USP30Q70CQ3 517 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 ZNF366Q8N895 744 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 CDK5RAP3Q96JB5 506 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SERAC1Q96JX3 654 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 MRPL45Q9BRJ2 306 aaKnown RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 MTMR12Q9C0I1 747 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 SLC25A18Q9H1K4 315 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 TMEM245Q9H330 911 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 FOXP1Q9H334 677 aaPredicted RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 PRSS16Q9NQE7 514 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 FBXL12Q9NXK8 326 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 ZNF510Q9Y2H8 683 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
AC004540.1-204ENST00000449537 CDRT15L2A8MXV6 281 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 CYBBP04839 570 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 ZNF776Q68DI1 518 aaPredicted RBP13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 SPATS2Q86XZ4 545 aaKnown RBP13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 SLC25A45Q8N413 288 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 MFSD2AQ8NA29 543 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 SCML1Q9UN30 329 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 NME7Q9Y5B8 376 aa13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
AC004540.1-204ENST00000449537 C2CD3Q4AC94 2353 aa13.2□□□□□ -0.3
AC004540.1-204ENST00000449537 A0A1B0GVM2 712 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms