RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PYGMP11217 842 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 HOXB8P17481 243 aaPredicted RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 ADRA1BP35368 520 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 KPNA1P52294 538 aaPredicted RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 PPP2R5DQ14738 602 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 GET4Q7L5D6 327 aaPredicted RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 PYROXD2Q8N2H3 581 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 EXD1Q8NHP7 514 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 UBE2Q2Q8WVN8 375 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 SLC39A13Q96H72 371 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 RBM41Q96IZ5 413 aaKnown RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 KCTD15Q96SI1 283 aaPredicted RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 CALN1Q9BXU9 219 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 SLC46A2Q9BY10 475 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 SMG9Q9H0W8 520 aaKnown RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNF-208ENST00000449264 ARHGEF38Q9NXL2 777 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 XPO7Q9UIA9 1087 aaKnown RBP15.18■□□□□ 0.02
TNF-208ENST00000449264 SNX10Q9Y5X0 201 aa15.18■□□□□ 0.02
TNF-208ENST00000449264 NUP210Q8TEM1 1887 aaPredicted RBP15.17■□□□□ 0.02
TNF-208ENST00000449264 PAPLNO95428 1278 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 SLC2A3P11169 496 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 FSHRP23945 695 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
TNF-208ENST00000449264 AVPR1AP37288 418 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 AIF1P55008 147 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 COG7P83436 770 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 CCDC85BQ15834 202 aaPredicted RBP15.17■□□□□ 0.02
TNF-208ENST00000449264 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 CES5AQ6NT32 575 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 PBKQ96KB5 322 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
TNF-208ENST00000449264 KLF16Q9BXK1 252 aaPredicted RBP15.17■□□□□ 0.02
TNF-208ENST00000449264 SIK2Q9H0K1 926 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 TASP1Q9H6P5 420 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 CLUHO75153 1309 aa15.17■□□□□ 0.02
TNF-208ENST00000449264 SCAMP3O14828 347 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 PAGE1O75459 146 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 KDELR1P24390 212 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 RING1Q06587 406 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 SCAPQ12770 1279 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CBX2Q14781 532 aaPredicted RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 DPYSL2Q16555 572 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CCDC181Q5TID7 509 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 NUGGCQ68CJ6 796 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 MFSD7Q6UXD7 560 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CMTM8Q8IZV2 173 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 ATP6V0D2Q8N8Y2 350 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 PLD4Q96BZ4 506 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 PCDH18Q9HCL0 1135 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CREB3O43889 395 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 STC2O76061 302 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 FOSL2P15408 326 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 PRLRP16471 622 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CORO1AP31146 461 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 LTBRP36941 435 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 SLC7A9P82251 487 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 ITIH3Q06033 890 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 HABP4Q5JVS0 413 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 KAZNQ674X7 775 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 SPOCD1Q6ZMY3 1216 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 ANKS1BQ7Z6G8 1248 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 PSTKQ8IV42 348 aaKnown RBP15.16■□□□□ 0.02
TNF-208ENST00000449264 UNC45BQ8IWX7 931 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 RCOR2Q8IZ40 523 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 DEFB123Q8N688 67 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 WBP2Q969T9 261 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 ZSWIM3Q96MP5 696 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 HEMGNQ9BXL5 484 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 SLC12A6Q9UHW9 1150 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 CDC23Q9UJX2 597 aa15.16■□□□□ 0.02
TNF-208ENST00000449264 DENND4AQ7Z401 1863 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 DOCK8Q8NF50 2099 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
TNF-208ENST00000449264 FAM72CH0Y354 149 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 FGGP02679 453 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 PFKLP17858 780 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 L1CAMP32004 1257 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 CETN2P41208 172 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 ZXDBP98169 803 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 PDK2Q15119 407 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 SKIV2LQ15477 1246 aaKnown RBP15.15■□□□□ 0.02
TNF-208ENST00000449264 ATAT1Q5SQI0 421 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 FAM72AQ5TYM5 149 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 PIK3R6Q5UE93 754 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 FAM72DQ6L9T8 149 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
TNF-208ENST00000449264 FAM72BQ86X60 149 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 DENND1CQ8IV53 801 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms