RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PPP1R2P3Q6NXS1 205 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TRIM72Q6ZMU5 477 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 LYSMD3Q7Z3D4 306 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 DSELQ8IZU8 1212 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ZNF786Q8N393 782 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 FAM47BQ8NA70 645 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 PCYOX1LQ8NBM8 494 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 HPS1Q92902 700 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 COG8Q96MW5 612 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 KLHL25Q9H0H3 589 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 MKS1Q9NXB0 559 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 VPS51Q9UID3 782 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SPO11Q9Y5K1 396 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 C1orf232A0A0U1RR37 186 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 CSPG5O95196 566 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 CFHP08603 1231 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ENO3P13929 434 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 FGFR3P22607 806 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ME2P23368 584 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 RCVRNP35243 200 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 EIF3EP60228 445 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 DPYSL3Q14195 570 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SNRNP35Q16560 246 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 PHKG1Q16816 387 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 AARS2Q5JTZ9 985 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 OTOP1Q7RTM1 612 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 DAW1Q8N136 415 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SLC15A4Q8N697 577 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 APBB2Q92870 758 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 RTFDC1Q9BY42 306 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TRPV6Q9H1D0 765 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 EHD1Q9H4M9 534 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 PARVBQ9HBI1 364 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 GPRC5DQ9NZD1 345 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ZC3H7BQ9UGR2 993 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 COQ4Q9Y3A0 265 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TCN1P20061 433 aaPredicted RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SREBF1P36956 1147 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 IREB2P48200 963 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 NRLP54845 237 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 GNA12Q03113 381 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 DCUN1D2Q6PH85 259 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SNX32Q86XE0 403 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 C12orf56Q8IXR9 622 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 OLFM1Q99784 485 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SLC4A5Q9BY07 1137 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 C1orf112Q9NSG2 853 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 SACM1LQ9NTJ5 587 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 KCND2Q9NZV8 630 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 TTLL3Q9Y4R7 772 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 CORINQ9Y5Q5 1042 aa9.69□□□□□ -0.86
SYNPO2-204ENST00000448416 NOL3O60936 208 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 DGKIO75912 1065 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 FGF3P11487 239 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 EVA1CP58658 441 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 TRAF2Q12933 501 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 DPYSQ14117 519 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 DDX60LQ5H9U9 1706 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 TTC33Q6PID6 262 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 ZSCAN18Q8TBC5 510 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 EFHD2Q96C19 240 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 KLHL32Q96NJ5 620 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 FRMD8Q9BZ67 464 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 UNKQ9C0B0 810 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 H0YJX3 145 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 PLOD2O00469 737 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 FOSP01100 380 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 CAPNS1P04632 268 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 SERPINE1P05121 402 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 MRPS9P82933 396 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 CEACAM7Q14002 265 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 PIGGQ5H8A4 983 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 IL23RQ5VWK5 629 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 TATDN1Q6P1N9 297 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 ENOSF1Q7L5Y1 443 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 ATP6V1E2Q96A05 226 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 WNK4Q96J92 1243 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 PNPLA8Q9NP80 782 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 DDX56Q9NY93 547 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 SERPINB2P05120 415 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 EIF2S1P05198 315 aaKnown RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 HOXA13P31271 388 aaPredicted RBP9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 GABRB2P47870 512 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 SNAP25P60880 206 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 NOMO3P69849 1222 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 GCNT1Q02742 428 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 NDUFA5Q16718 116 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 ANKRD26P1Q6NSI1 321 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 TMEM26Q6ZUK4 368 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 SV2AQ7L0J3 742 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 ARL13BQ3SXY8 428 aa9.68□□□□□ -0.86
SYNPO2-204ENST00000448416 N4BP2L1Q5TBK1 243 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms