RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 KCNU1A8MYU2 1149 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 MOCS2O96007 188 aaPredicted RBP20.25■□□□□ 0.83
SGCE-207ENST00000447873 IGLV3-27P01718 113 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 KDELR1P24390 212 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CETN2P41208 172 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CDH6P55285 790 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 PDK2Q15119 407 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CA9Q16790 459 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 PPP6R3Q5H9R7 873 aaPredicted RBP20.25■□□□□ 0.83
SGCE-207ENST00000447873 NUGGCQ68CJ6 796 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 UNC45BQ8IWX7 931 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 PLD4Q96BZ4 506 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 KLF16Q9BXK1 252 aaPredicted RBP20.25■□□□□ 0.83
SGCE-207ENST00000447873 ANLNQ9NQW6 1124 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 GKN1Q9NS71 199 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CLEC1BQ9P126 229 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 ZMYM5Q9UJ78 669 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CLUHO75153 1309 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 I6L893 689 aaPredicted RBP20.25■□□□□ 0.83
SGCE-207ENST00000447873 AVPR1AP37288 418 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 KCNQ1P51787 676 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 ITIH3Q06033 890 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 DPYSL2Q16555 572 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CES5AQ6NT32 575 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 AADACL2Q6P093 401 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 MFSD7Q6UXD7 560 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 ING5Q8WYH8 240 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 HAPLN3Q96S86 360 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CALN1Q9BXU9 219 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 ADAM7Q9H2U9 754 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 CPQQ9Y646 472 aa20.25■□□□□ 0.83
SGCE-207ENST00000447873 TBX10O75333 385 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 PAGE1O75459 146 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 CD48P09326 243 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 CEBPBP17676 345 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 L1CAMP32004 1257 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 HARS2P49590 506 aaKnown RBP20.24■□□□□ 0.83
SGCE-207ENST00000447873 COPS2P61201 443 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 SLC7A9P82251 487 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 DLX2Q07687 328 aaPredicted RBP20.24■□□□□ 0.83
SGCE-207ENST00000447873 MTA1Q13330 715 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 CCDC181Q5TID7 509 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 GPR153Q6NV75 609 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 SPOCD1Q6ZMY3 1216 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 CREG2Q8IUH2 290 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 PYROXD2Q8N2H3 581 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 ATP6V0D2Q8N8Y2 350 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 ITFG1Q8TB96 612 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 BTN2A3PQ96KV6 586 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 MAGEB5Q9BZ81 275 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 PCDH18Q9HCL0 1135 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 MRFAP1Q9Y605 127 aa20.24■□□□□ 0.83
SGCE-207ENST00000447873 SZT2Q5T011 3432 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 C3orf70A6NLC5 250 aaPredicted RBP20.23■□□□□ 0.83
SGCE-207ENST00000447873 STC2O76061 302 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 IRF1P10914 325 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 FSHRP23945 695 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 HELZP42694 1942 aaKnown RBP20.23■□□□□ 0.83
SGCE-207ENST00000447873 ARSEP51690 589 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 DPYSL3Q14195 570 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 LLGL1Q15334 1064 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 TFDP3Q5H9I0 405 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 ATAT1Q5SQI0 421 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 CMTM8Q8IZV2 173 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 PABPC5Q96DU9 382 aaKnown RBP20.23■□□□□ 0.83
SGCE-207ENST00000447873 ZFRQ96KR1 1074 aaKnown RBP20.23■□□□□ 0.83
SGCE-207ENST00000447873 KCTD15Q96SI1 283 aaPredicted RBP20.23■□□□□ 0.83
SGCE-207ENST00000447873 SIK2Q9H0K1 926 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 OSBPL2Q9H1P3 480 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 RNF14Q9UBS8 474 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 OR12D3Q9UGF7 316 aa20.23■□□□□ 0.83
SGCE-207ENST00000447873 PAFAH1B1P43034 410 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 COL19A1Q14993 1142 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 Q7L0L9 218 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 RASGEF1CQ8N431 466 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 FAM71BQ8TC56 605 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 ACTRT1Q8TDG2 376 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 OSBPL8Q9BZF1 889 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 MTMR10Q9NXD2 777 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 XPO7Q9UIA9 1087 aaKnown RBP20.22■□□□□ 0.83
SGCE-207ENST00000447873 CDH22Q9UJ99 828 aa20.22■□□□□ 0.83
SGCE-207ENST00000447873 PGRMC1O00264 195 aaKnown RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 CREB3O43889 395 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 FGGP02679 453 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 LTBRP36941 435 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 ARL4AP40617 200 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 CDKN2BP42772 138 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 CBX2Q14781 532 aaPredicted RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 PPP2R5EQ16537 467 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 WHAMMP3Q1A5X7 153 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 ANKS1BQ7Z6G8 1248 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 VSIG1Q86XK7 387 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 TTC16Q8NEE8 873 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 MYLIPQ8WY64 445 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 NAP1L3Q99457 506 aaPredicted RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 EPAS1Q99814 870 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 ZNF670Q9BS34 389 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 HEMGNQ9BXL5 484 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms