RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 ETV4P43268 484 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 SEPT7Q16181 437 aaKnown RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 UNC5AQ6ZN44 842 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 OTOAQ7RTW8 1153 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 TMEM86AQ8N2M4 240 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 KLHL23Q8NBE8 558 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 TRPV1Q8NER1 839 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 SPATA13Q96N96 652 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 EBNA1BP2Q99848 306 aaKnown RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 MTG1Q9BT17 334 aaPredicted RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 CHST12Q9NRB3 414 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 DDX43Q9NXZ2 648 aaKnown RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ST3GAL5Q9UNP4 418 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 CXorf49A8MYA2 514 aaPredicted RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 H3BRJ5 948 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 MFSD11O43934 449 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 FAM200BP0CF97 657 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 RARBP10826 455 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 PAX7P23759 505 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 FDFT1P37268 417 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ANKRD20A2Q5SQ80 823 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ANKRD20A1Q5TYW2 823 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 ANKRD20A3Q5VUR7 823 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 SYPL2Q5VXT5 272 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 HACE1Q8IYU2 909 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 SIX6OS1Q8N1H7 587 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 C10orf82Q8WW14 230 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 WNT8BQ93098 351 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 MED10Q9BTT4 135 aa16.81■□□□□ 0.28
OTUB1-204ENST00000447683 M0QYT0 321 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 FBXO21O94952 628 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 MLH1P40692 756 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 SKIV2L2P42285 1042 aaKnown RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 LHX1P48742 406 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 TKTL1P51854 596 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 GJA9P57773 515 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CDK16Q00536 496 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 PRKD1Q15139 912 aaPredicted RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CHSY1Q86X52 802 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CCDC33Q8N5R6 958 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 APBB2Q92870 758 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 SLC9A7Q96T83 725 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 GAD1Q99259 594 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 SMYD2Q9NRG4 433 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 KRT82Q9NSB4 513 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 MIOSQ9NXC5 875 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 TNPO2O14787 897 aaKnown RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 FYNP06241 537 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 THP07101 528 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 SNRPAP09012 282 aaKnown RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 MLNP12872 115 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 MAP3K7CLP57077 242 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 PAFAH1B3Q15102 231 aaKnown RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 HFE2Q6ZVN8 426 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CYS1Q717R9 158 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 CTAGE3PQ8IX95 158 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 GSDMBQ8TAX9 411 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 LGMNQ99538 433 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 SYT15Q9BQS2 421 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
OTUB1-204ENST00000447683 TMPRSS4Q9NRS4 437 aa16.8■□□□□ 0.28
OTUB1-204ENST00000447683 FAM159BA6NKW6 160 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 C9IYK1 514 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 TRIM49D1C9J1S8 452 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 NRP1O14786 923 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 KRT37O76014 449 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 SNUPNO95149 360 aaKnown RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 PYGBP11216 843 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 CCNB1P14635 433 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 GLUD2P49448 558 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 DAOAP59103 153 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 DEUP1Q05D60 604 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 DPYSQ14117 519 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 SETDB1Q15047 1291 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 SLC5A9Q2M3M2 681 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 LGSNQ5TDP6 509 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 GDF6Q6KF10 455 aaPredicted RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 RSPH3Q86UC2 560 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 MPP5Q8N3R9 675 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 ZNF398Q8TD17 642 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 SMOQ99835 787 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 MANSC1Q9H8J5 431 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 CHKBQ9Y259 395 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 PCDHA11Q9Y5I1 949 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 CHRNA1P02708 482 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 NQO1P15559 274 aaKnown RBP16.79■□□□□ 0.28
OTUB1-204ENST00000447683 GRIA1P42261 906 aa16.79■□□□□ 0.28
OTUB1-204ENST00000447683 AFF1P51825 1210 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms