RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 BTKQ06187 659 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 POU5F1BQ06416 359 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 NAB1Q13506 487 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 GOLGA7BQ2TAP0 167 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 SLC10A6Q3KNW5 377 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 PPP6R3Q5H9R7 873 aaPredicted RBP19.68■□□□□ 0.74
SDCBP-204ENST00000447182 PMF1Q6P1K2 205 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 MTHFD1LQ6UB35 978 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 LRRN4Q8WUT4 740 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 TRAPPC12Q8WVT3 735 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 BTBD7Q9P203 1132 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 DCDC2Q9UHG0 476 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 BAG2O95816 211 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 SERPINE1P05121 402 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 UBTFL6P0CB48 400 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 ALOX15P16050 662 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 GRIA1P42261 906 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 CLCN3P51790 818 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 TMEM132DQ14C87 1099 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 KYAT1Q16773 422 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 N4BP2L1Q5TBK1 243 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 AP1ARQ63HQ0 302 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 PGM2L1Q6PCE3 622 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 GSTCDQ8NEC7 633 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 ATP2A3Q93084 1043 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 GBP5Q96PP8 586 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 DNAJC28Q9NX36 388 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 MORF4L1Q9UBU8 362 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 HESX1Q9UBX0 185 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 MEI4A8MW99 385 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 SIN3BO75182 1162 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 LYPLA1O75608 230 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 MYCNP04198 464 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 GRK2P25098 689 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 PTPN9P43378 593 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 COPAP53621 1224 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 RBP5P82980 135 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 PDE1BQ01064 536 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 PDE1CQ14123 709 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 AMHR2Q16671 573 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 INSCQ1MX18 579 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 PRAMEF18Q5VWM3 479 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 KCNT2Q6UVM3 1135 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 EEPD1Q7L9B9 569 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 DHDDSQ86SQ9 333 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 ZDHHC17Q8IUH5 632 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 CCNJLQ8IV13 435 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 ARHGAP18Q8N392 663 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 C12orf29Q8N999 325 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 CDKL2Q92772 493 aa19.67■□□□□ 0.74
SDCBP-204ENST00000447182 C11orf84Q9BUA3 381 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-204ENST00000447182 HBP1O60381 514 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 FDFT1P37268 417 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PHKA2P46019 1235 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 RPL10AP62906 217 aaKnown RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 IRX4P78413 519 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 SLC25A3Q00325 362 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PCLAFQ15004 111 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 DPY19L2Q6NUT2 758 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 C16orf46Q6P387 395 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PACS1Q6VY07 963 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 TTC30AQ86WT1 665 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 SLC35F5Q8WV83 523 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 JADE3Q92613 823 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 CENPIQ92674 756 aaPredicted RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PDZD7Q9H5P4 517 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 IL1RAPL1Q9NZN1 696 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 EVPLQ92817 2033 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 TPP1O14773 563 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PAPSS1O43252 624 aaPredicted RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PEX10O60683 326 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 USP1O94782 785 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PPP1R26Q5T8A7 1209 aaPredicted RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 HEATR6Q6AI08 1181 aaKnown RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 ACAD11Q709F0 780 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 PDSS2Q86YH6 399 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 IFNLR1Q8IU57 520 aaPredicted RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 APOBEC3FQ8IUX4 373 aaKnown RBP19.66■□□□□ 0.74
SDCBP-204ENST00000447182 HACE1Q8IYU2 909 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 SLC25A41Q8N5S1 370 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 ACTRT2Q8TDY3 377 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 AZIN2Q96A70 460 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 SORT1Q99523 831 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 XPNPEP3Q9NQH7 507 aa19.66■□□□□ 0.74
SDCBP-204ENST00000447182 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 WDR27A2RRH5 827 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 A6NJR5 290 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 PIM1P11309 404 aaPredicted RBP19.65■□□□□ 0.74
SDCBP-204ENST00000447182 ADORA2AP29274 412 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 SNX16P57768 344 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 XIAPP98170 497 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 LRRC8BQ6P9F7 803 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 RAPH1Q70E73 1250 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 MAVSQ7Z434 540 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 NT5DC4Q86YG4 428 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 SCUBE3Q8IX30 993 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 OR6Y1Q8NGX8 325 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 PPP4R1Q8TF05 950 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 TUBGCP5Q96RT8 1024 aa19.65■□□□□ 0.74
SDCBP-204ENST00000447182 MMP19Q99542 508 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms