RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 LTFP02788 710 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 THRAP10827 490 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 CYP2F1P24903 491 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 PSMA4P25789 261 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 HPCAL1P37235 193 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ITGA8P53708 1063 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SLC6A3Q01959 620 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 PPARDQ03181 441 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 MGAT5Q09328 741 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TMEM119Q4V9L6 283 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 DAB2IPQ5VWQ8 1189 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 BHLHB9Q6PI77 547 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SV2AQ7L0J3 742 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 OTOAQ7RTW8 1153 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SYTL1Q8IYJ3 562 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 RIPOR3Q96MK2 946 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 OSGEPL1Q9H4B0 414 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ANLNQ9NQW6 1124 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 IMPAD1Q9NX62 359 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 BTBD7Q9P203 1132 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ACOT9Q9Y305 439 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 PRR23AA6NEV1 266 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SEC31AO94979 1220 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 FGFR4P22455 802 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 GRK4P32298 578 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 S100A5P33763 92 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 CDK7P50613 346 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ADIGQ0VDE8 80 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 MPP3Q13368 585 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 GSTA3Q16772 222 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SMTNL2Q2TAL5 461 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SLC30A10Q6XR72 485 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 GAS2L3Q86XJ1 694 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 AURKCQ9UQB9 309 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 H3BQF6 201 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 MYO1CO00159 1063 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 NCK2O43639 380 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ZBTB14O43829 449 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ZNF24P17028 368 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ILDR2Q71H61 639 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 P3H2Q8IVL5 708 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 NUP93Q8N1F7 819 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 MANSC1Q9H8J5 431 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 FAM153AQ9UHL3 310 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SLC45A1Q9Y2W3 748 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 MON2Q7Z3U7 1717 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 SYNDIG1LA6NDD5 238 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 RECQL4O94761 1208 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 INAVAQ3KP66 663 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 VSTM1Q6UX27 236 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TERB1Q8NA31 727 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 A0A087X1B8 175 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 PIPSLA2A3N6 862 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 FOXN3O00409 490 aaPredicted RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TRDMT1O14717 391 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 FTH1P02794 183 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 CNPP09543 421 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 IMPDH2P12268 514 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 CD151P48509 253 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TUBP50607 506 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 HNRNPH2P55795 449 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 DENND5BQ6ZUT9 1274 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 TIFAQ96CG3 184 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 FAXDC2Q96IV6 333 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 DNAJC1Q96KC8 554 aaKnown RBP8.76□□□□□ -1.01
PTPN3-204ENST00000446349 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 PCDHA3Q9Y5H8 950 aa8.76□□□□□ -1.01
PTPN3-204ENST00000446349 BCL9LQ86UU0 1499 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 CATP04040 527 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 NPR3P17342 541 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SPPL2BQ8TCT7 592 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 C2orf15Q8WU43 125 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 AGXT2Q9BYV1 514 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 EPN3Q9H201 632 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 EFCAB1Q9HAE3 211 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 MED1Q15648 1581 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 TCP11X1B4DZS4 312 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SMIM10L2AP0DMW4 78 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SMIM10L2BP0DMW5 78 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 AMHR2Q16671 573 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 TMEM259Q4ZIN3 620 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 LPCAT2Q7L5N7 544 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 KCTD10Q9H3F6 313 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SFMBT1Q9UHJ3 866 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 SLC27A6Q9Y2P4 619 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 C15orf38-AP3S2A0A0A6YYH1 394 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 DEAF1O75398 565 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 MICAL2O94851 1124 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ITGAXP20702 1163 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 DGKAP23743 735 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PEX5P50542 639 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 PLEKHM3Q6ZWE6 761 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 DUSP11O75319 330 aaKnown RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 MAFO75444 373 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-204ENST00000446349 NDUFV1P49821 464 aa8.75□□□□□ -1.01
PTPN3-204ENST00000446349 ENPEPQ07075 957 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms