RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TRPM3Q9HCF6 1732 aaPredicted RBP17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ERI2A8K979 691 aaKnown RBP17.08■□□□□ 0.32
TCOF1-206ENST00000445265 KCNK1O00180 336 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 RBP1P09455 135 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ZNF286BP0CG31 522 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SLC2A3P11169 496 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ATP6V1B1P15313 513 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CREB1P16220 341 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 PPM1FP49593 454 aaPredicted RBP17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CPT1AP50416 773 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 MAP3K7CLP57077 242 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CCL15Q16663 113 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.322e-7■■■■■ 102.3
TCOF1-206ENST00000445265 SHCBP1Q8NEM2 672 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 VAT1Q99536 393 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 EGFL8Q99944 293 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 MAF1Q9H063 256 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 CPB1P15086 417 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 IFNEQ86WN2 208 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 BORCS6Q96GS4 357 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 VTA1Q9NP79 307 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 SUPT7LO94864 414 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 C16orf46Q6P387 395 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 VSTM1Q6UX27 236 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 TAS2R42Q7RTR8 314 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 HSFY1Q96LI6 401 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 STN1Q9H668 368 aaKnown RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 UMODL1Q5DID0 1318 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 MEI4A8MW99 385 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 DCXO43602 365 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 DGKZQ13574 1117 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 FASTKD3Q14CZ7 662 aaKnown RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 WNK4Q96J92 1243 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 CNBD2Q96M20 576 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 TPP1O14773 563 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 PROCP04070 461 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 ARL2P36404 184 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 SEC14L1Q92503 715 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
TCOF1-206ENST00000445265 ANKRD6Q9Y2G4 727 aa17.07■□□□□ 0.32
TCOF1-206ENST00000445265 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 ZNF135P52742 658 aaPredicted RBP17.06■□□□□ 0.32
TCOF1-206ENST00000445265 HDAC4P56524 1084 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 CPNE8Q86YQ8 564 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 NMRAL1Q9HBL8 299 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 SYCE1LA8MT33 242 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 KRT36O76013 467 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 SEC24DO94855 1032 aaPredicted RBP17.06■□□□□ 0.32
TCOF1-206ENST00000445265 MLH1P40692 756 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 WASHC5Q12768 1159 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 C16orf87Q6PH81 154 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 THAP11Q96EK4 314 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 FBXL18Q96ME1 805 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 CPXM1Q96SM3 734 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 FBXO6Q9NRD1 293 aaPredicted RBP17.06■□□□□ 0.32
TCOF1-206ENST00000445265 ADARB2Q9NS39 739 aaKnown RBP17.06■□□□□ 0.32
TCOF1-206ENST00000445265 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 FOXO6A8MYZ6 492 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 TSTA3Q13630 321 aaPredicted RBP17.06■□□□□ 0.32
TCOF1-206ENST00000445265 GRAMD4Q6IC98 578 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 ZFP1Q6P2D0 407 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 FAM192AQ9GZU8 254 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 NUP98P52948 1817 aa17.06■□□□□ 0.32
TCOF1-206ENST00000445265 ASMTLO95671 621 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CLPTM1O96005 669 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 LGALS2P05162 132 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 NAIF1Q69YI7 327 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CNDP1Q96KN2 507 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SETD4Q9NVD3 440 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SNCAIPQ9Y6H5 919 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 LAMA4Q16363 1823 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 MYH3P11055 1940 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 TGDSO95455 350 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 PSMC3P17980 439 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 NOS2P35228 1153 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 KCNK10P57789 538 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CES3Q6UWW8 571 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms