RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 NUGGCQ68CJ6 796 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 AZIN2Q96A70 460 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 SNRNP25Q9BV90 132 aaKnown RBP15.69■□□□□ 0.1
CCNE1-203ENST00000444983 MAGEB5Q9BZ81 275 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 CCL26Q9Y258 94 aa15.69■□□□□ 0.1
CCNE1-203ENST00000444983 USP15Q9Y4E8 981 aaPredicted RBP15.69■□□□□ 0.1
CCNE1-203ENST00000444983 GRXCR2A6NFK2 248 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 PRAMEF12O95522 483 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 ATP1A1P05023 1023 aaKnown RBP15.68■□□□□ 0.1
CCNE1-203ENST00000444983 KCNA5P22460 613 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 CLUL1Q15846 466 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 ARID3BQ8IVW6 561 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-203ENST00000444983 UNC45BQ8IWX7 931 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 KATNAL2Q8IYT4 538 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 RIN3Q8TB24 985 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 ZSCAN18Q8TBC5 510 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-203ENST00000444983 HLA-CQ95604 372 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 ASB16Q96NS5 453 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 HAPLN3Q96S86 360 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 SMG9Q9H0W8 520 aaKnown RBP15.68■□□□□ 0.1
CCNE1-203ENST00000444983 TRPV4Q9HBA0 871 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 TDP1Q9NUW8 608 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 SMPD4Q9NXE4 827 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
CCNE1-203ENST00000444983 STOML2Q9UJZ1 356 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 CDH7Q9ULB5 785 aa15.68■□□□□ 0.1
CCNE1-203ENST00000444983 C3orf70A6NLC5 250 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 KIF2AO00139 706 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 PAGE1O75459 146 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SEMA3BQ13214 749 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 MTA1Q13330 715 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 DPYSL2Q16555 572 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 CA9Q16790 459 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SMTNL2Q2TAL5 461 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 ARL13BQ3SXY8 428 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 FAM78AQ5JUQ0 283 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 DCAF12L1Q5VU92 463 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 PAPD7Q5XG87 772 aaKnown RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SYT10Q6XYQ8 523 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 Q6ZNB5 142 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 HTR3DQ70Z44 454 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 GET4Q7L5D6 327 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 BTN2A3PQ96KV6 586 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 C1orf74Q96LT6 269 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 MYADMQ96S97 322 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 OSBPL2Q9H1P3 480 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SLITRK6Q9H5Y7 841 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 ZWILCHQ9H900 591 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 DNAI1Q9UI46 699 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 UNC80Q8N2C7 3258 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 LEFTY2O00292 366 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 MBTPS2O43462 519 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 HMBSP08397 361 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 PRLRP16471 622 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 IL4RP24394 825 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 L1CAMP32004 1257 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SSR1P43307 286 aaKnown RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 MLLT6P55198 1093 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 NRG1Q02297 640 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SMAD4Q13485 552 aaKnown RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 RPS6KA1Q15418 735 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 UBL4BQ8N7F7 174 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 KIAA1958Q8N8K9 716 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 RAPGEF5Q92565 580 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 SMARCD2Q92925 531 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 LRRC3BQ96PB8 259 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 NAPGQ99747 312 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 PRMT1Q99873 361 aaKnown RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 DDX56Q9NY93 547 aaKnown RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 AP4E1Q9UPM8 1137 aa15.67■□□□□ 0.1
CCNE1-203ENST00000444983 ZFP37Q9Y6Q3 630 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-203ENST00000444983 LATS1O95835 1130 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 APOEP02649 317 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 LAMP2P13473 410 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 FCARP24071 287 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 HARS2P49590 506 aaKnown RBP15.66■□□□□ 0.1
CCNE1-203ENST00000444983 RWDD2BP57060 319 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 AMPD2Q01433 879 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 ZNF77Q15935 545 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 TAZQ16635 292 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 MS4A13Q5J8X5 152 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 PIK3R6Q5UE93 754 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 NADSYN1Q6IA69 706 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 ANKS1BQ7Z6G8 1248 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 VSIG1Q86XK7 387 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 DDX42Q86XP3 938 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCNE1-203ENST00000444983 FAM217AQ8IXS0 508 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 ZNF683Q8IZ20 524 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 PYROXD2Q8N2H3 581 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 EXD1Q8NHP7 514 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 SH3RF2Q8TEC5 729 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 TSC1Q92574 1164 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 RNF34Q969K3 372 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 ACSF2Q96CM8 615 aaPredicted RBP15.66■□□□□ 0.1
CCNE1-203ENST00000444983 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
CCNE1-203ENST00000444983 CARD9Q9H257 536 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms