RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 GABRQQ9UN88 632 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 IPPQ9Y573 584 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 PCDHB12Q9Y5F1 795 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ATXN2Q99700 1313 aaKnown RBP10.92□□□□□ -0.66
TOP3B-210ENST00000444502 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 SLX4Q8IY92 1834 aa10.92□□□□□ -0.66
TOP3B-210ENST00000444502 ANKRD33BA6NCL7 494 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 TRIM49D1C9J1S8 452 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 NVLO15381 856 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 NUDT17P0C025 328 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 MBL2P11226 248 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ZFXP17010 805 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 KDELR1P24390 212 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 WNT7BP56706 349 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 GEMIN4P57678 1058 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PLEKHA7Q6IQ23 1121 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ZDHHC24Q6UX98 284 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 NUDCD3Q8IVD9 361 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PLEKHG4BQ96PX9 1271 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PAFAH2Q99487 392 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PCDH9Q9HC56 1237 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 KANSL3Q9P2N6 904 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 SMG5Q9UPR3 1016 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ELK3P41970 407 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 CACNA2D1P54289 1103 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ARHGAP1Q07960 439 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 MTA1Q13330 715 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ZNF268Q14587 947 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 RASAL3Q86YV0 1011 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PDCD7Q8N8D1 485 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 FAM111AQ96PZ2 611 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 PCMTD2Q9NV79 361 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 DCTN3O75935 186 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 SP100P23497 879 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 KLRC2P26717 231 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ERMARDQ5T6L9 678 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 ULBP1Q9BZM6 244 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 EBF2Q9HAK2 575 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 UBAP1Q9NZ09 502 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 UBP1Q9NZI7 540 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 BLOC1S6Q9UL45 172 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 AP4E1Q9UPM8 1137 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 SIGLEC16A6NMB1 481 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 RPLP2P05387 115 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 IMPDH2P12268 514 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 STIP1P31948 543 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 MAGEA10P43363 369 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 COPS2P61201 443 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 TXNRD3NBQ6F5E7 133 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 DEFB106AQ8N104 65 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 C1orf127Q8N9H9 656 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 AGR3Q8TD06 166 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 MRPS31Q92665 395 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 NMD3Q96D46 503 aaKnown RBP10.91□□□□□ -0.66
TOP3B-210ENST00000444502 IGFLR1Q9H665 355 aa10.91□□□□□ -0.66
TOP3B-210ENST00000444502 MX2P20592 715 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 PBX3P40426 434 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 BMPR2Q13873 1038 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 CNGA2Q16280 664 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 APOL5Q9BWW9 433 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 MINDY3Q9H8M7 445 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 PHTF1Q9UMS5 762 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 ANGPTL3Q9Y5C1 460 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 hCG_1818297A0A087WSY0 165 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 SMIM28A0A1B0GU29 152 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 PRR23AA6NEV1 266 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-210ENST00000444502 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 MAGEA8P43361 318 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 YWHAZP63104 245 aaKnown RBP10.9□□□□□ -0.66
TOP3B-210ENST00000444502 CDH18Q13634 790 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 NOMO2Q5JPE7 1267 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 ARHGAP24Q8N264 748 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 AFAP1L2Q8N4X5 818 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 DBF4BQ8NFT6 615 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 VPS39Q96JC1 886 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 CENPKQ9BS16 269 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 STRA6Q9BX79 667 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 ZDHHC18Q9NUE0 388 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 TRPM5Q9NZQ8 1165 aa10.9□□□□□ -0.66
TOP3B-210ENST00000444502 SMIM35A0A1B0GVV1 85 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 HAUS5O94927 633 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 CD48P09326 243 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 SPATA31D3P0C874 917 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 NCF2P19878 526 aaPredicted RBP10.9□□□□□ -0.67
TOP3B-210ENST00000444502 RBL1P28749 1068 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 RPL22P35268 128 aaKnown RBP10.9□□□□□ -0.67
TOP3B-210ENST00000444502 HADHBP55084 474 aaKnown RBP10.9□□□□□ -0.67
TOP3B-210ENST00000444502 USP46P62068 366 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 DENND5BQ6ZUT9 1274 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 TAS2R42Q7RTR8 314 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 CRLF3Q8IUI8 442 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms