RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 EOGTQ5NDL2 527 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 PKN3Q6P5Z2 889 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 TSSK4Q6SA08 328 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 NAT16Q8N8M0 369 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 BTN2A3PQ96KV6 586 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 CBX8Q9HC52 389 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 EBF1Q9UH73 591 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 R4GN57 208 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 DOCK4Q8N1I0 1966 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 CKAP5Q14008 2032 aa13.05□□□□□ -0.32
CDCA4P3-201ENST00000442572 CEP192Q8TEP8 1941 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TIMM44O43615 452 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 GFRA3O60609 400 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 SERPINC1P01008 464 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 APOEP02649 317 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 MMEP08473 750 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 FERP16591 822 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 MATKP42679 507 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 DGKEP52429 567 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 KDSRQ06136 332 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 C10orf76Q5T2E6 689 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 ACBD5Q5T8D3 534 aaPredicted RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 RNF43Q68DV7 783 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 PPP1R2P3Q6NXS1 205 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 ZNF513Q8N8E2 541 aaPredicted RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 IL17RCQ8NAC3 791 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 DDI1Q8WTU0 396 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 UCMAQ8WVF2 138 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TJP2Q9UDY2 1190 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
CDCA4P3-201ENST00000442572 TEX33O43247 280 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 APBB3O95704 486 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 F9P00740 461 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 HOXD9P28356 352 aaPredicted RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 NTSR1P30989 418 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 CCR1P32246 355 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 GSCP56915 257 aaPredicted RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 FMO1Q01740 532 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 NR1I3Q14994 352 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 CRY1Q16526 586 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 FAM133BQ5BKY9 247 aaKnown RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 TAF3Q5VWG9 929 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 SDE2Q6IQ49 451 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 PGAP3Q96FM1 320 aaPredicted RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 PLK2Q9NYY3 685 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 FAM186AA6NE01 2351 aa13.03□□□□□ -0.32
CDCA4P3-201ENST00000442572 CHRNB2P17787 502 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 ABCB4P21439 1286 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 MMP8P22894 467 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 TIE1P35590 1138 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 FNTBP49356 437 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 SEC13P55735 322 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 CENPCQ03188 943 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 TAF5Q15542 800 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 SLC25A52Q3SY17 297 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 NAA35Q5VZE5 725 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 LUZP1Q86V48 1076 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 C11orf74Q86VG3 221 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 ALLCQ8N6M5 410 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 TXNDC5Q8NBS9 432 aaKnown RBP13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 TSTD1Q8NFU3 115 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 NT5C3BQ969T7 300 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 NPY6RQ99463 290 aa13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.33
CDCA4P3-201ENST00000442572 FAM204AQ9H8W3 233 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms