RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CDK8P49336 464 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CASP4P49662 377 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 LGALS3BPQ08380 585 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 TROAPQ12815 778 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 DDR2Q16832 855 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ZNF57Q68EA5 555 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 IRF2BP1Q8IU81 584 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 BBS7Q8IWZ6 715 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 ANKRD13AQ8IZ07 590 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 EID3Q8N140 333 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 DCP1AQ9NPI6 582 aaPredicted RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
LIN54-202ENST00000442461 RIC8BQ9NVN3 520 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 CDH9Q9ULB4 789 aa10.58□□□□□ -0.72
LIN54-202ENST00000442461 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ITGAXP20702 1163 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 FOXN2P32314 431 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 GNA12Q03113 381 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 TRIM32Q13049 653 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 TSC22D1Q15714 1073 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ZIK1Q3SY52 487 aaPredicted RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 CERKLQ49MI3 558 aaPredicted RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 XKR5Q6UX68 686 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SPOCD1Q6ZMY3 1216 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 RTL3Q8N8U3 475 aaKnown RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 ATG16L2Q8NAA4 619 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 OR8H1Q8NGG4 311 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 C10orf82Q8WW14 230 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIN54-202ENST00000442461 OTULINQ96BN8 352 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PLEKHA5Q9HAU0 1116 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 LRRC4Q9HBW1 653 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CCDC167Q9P0B6 97 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 LGALS13Q9UHV8 139 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SLC13A4Q9UKG4 626 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PLA2G4CQ9UP65 541 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CRB1P82279 1406 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 HS6ST1O60243 411 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CCNT2O60583 730 aaKnown RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 CYP11B1P15538 503 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PRKACBP22694 351 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 RFC4P35249 363 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 RAP1GAPP47736 663 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PRKAA2P54646 552 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SPIRE1Q08AE8 756 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ANGPT1Q15389 498 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ARL13BQ3SXY8 428 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 LRRC17Q8N6Y2 441 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SYTL5Q8TDW5 730 aaPredicted RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 FAR1Q8WVX9 515 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ACSS3Q9H6R3 686 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 C8orf4Q9NR00 106 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PPM1HQ9ULR3 514 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SDR42E2A6NKP2 422 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PARNO95453 639 aaKnown RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 IFNA16P05015 189 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 GARTP22102 1010 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 TCP10Q12799 353 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 HERC3Q15034 1050 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ZNF699Q32M78 642 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CCDC117Q8IWD4 279 aaPredicted RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 C12orf56Q8IXR9 622 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 THNSL1Q8IYQ7 743 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 KCTD4Q8WVF5 259 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 SNX19Q92543 992 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 HDHD2Q9H0R4 259 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 ARMC7Q9H6L4 198 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 AVENQ9NQS1 362 aaPredicted RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 NUDT5Q9UKK9 219 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
LIN54-202ENST00000442461 POMPQ9Y244 141 aa10.57□□□□□ -0.72
LIN54-202ENST00000442461 NCAPD2Q15021 1401 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 GPR75-ASB3A0A0A6YYF3 556 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 ITM2AO43736 263 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 SUPT7LO94864 414 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 OXSR1O95747 527 aaPredicted RBP10.56□□□□□ -0.72
LIN54-202ENST00000442461 PDGFRBP09619 1106 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 PDGFRAP16234 1089 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 CCNCP24863 283 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 ECT2LQ008S8 904 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 ILF2Q12905 390 aaKnown RBP10.56□□□□□ -0.72
LIN54-202ENST00000442461 NCF4Q15080 339 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 TRIP4Q15650 581 aaPredicted RBP10.56□□□□□ -0.72
LIN54-202ENST00000442461 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 SHCBP1Q8NEM2 672 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 KBTBD7Q8WVZ9 684 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 ACSF2Q96CM8 615 aaPredicted RBP10.56□□□□□ -0.72
LIN54-202ENST00000442461 RCN3Q96D15 328 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 SIPA1Q96FS4 1042 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 ELMO2Q96JJ3 720 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 TMEM161AQ9NX61 479 aa10.56□□□□□ -0.72
LIN54-202ENST00000442461 GDAP2Q9NXN4 497 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms