RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TMLHEQ9NVH6 421 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 NINJ2Q9NZG7 142 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 FNIP2Q9P278 1114 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 TBX21Q9UL17 535 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 IKBKGQ9Y6K9 419 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 FRMPD3Q5JV73 1810 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 C5orf60A6NFR6 353 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 GCATO75600 419 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 UPP2O95045 317 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ACSL3O95573 720 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ITGB1P05556 798 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 GOT1P17174 413 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SKOR1P84550 965 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 MRPL58Q14197 206 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 PSMD5Q16401 504 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SKIDA1Q1XH10 827 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 BBS9Q3SYG4 887 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 SYPL2Q5VXT5 272 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 MSANTD2Q6P1R3 559 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 KCNT2Q6UVM3 1135 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 GPRIN1Q7Z2K8 1008 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 LRRTM3Q86VH5 581 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 LRRC49Q8IUZ0 686 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CMTR2Q8IYT2 770 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 HTR3CQ8WXA8 447 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 RIN2Q8WYP3 895 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 PIK3R5Q8WYR1 880 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 NDRG1Q92597 394 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 PRCCQ92733 491 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 ARL8AQ96BM9 186 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 LRRC39Q96DD0 335 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 ZNF333Q96JL9 665 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 PRDM5Q9NQX1 630 aaPredicted RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 PIGVQ9NUD9 493 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 CLIC5Q9NZA1 410 aa6.23□□□□□ -1.41
VPS50-205ENST00000441602 NOVA2Q9UNW9 492 aaKnown RBP6.23□□□□□ -1.41
VPS50-205ENST00000441602 A0A0A0MRY4 1105 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 ALOX15BO15296 676 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 CDH16O75309 829 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TCEA3O75764 348 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 BAIAP3O94812 1187 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 URODP06132 367 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 ZSCAN5DPP0CG00 497 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 HAPLN1P10915 354 aaPredicted RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 TPSB2P20231 275 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 RBL1P28749 1068 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 GJA8P48165 433 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TBX4P57082 545 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 PPP2R2AP63151 447 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TPSAB1Q15661 275 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 CCDC38Q502W7 563 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TPGS2Q68CL5 300 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 BNIPLQ7Z465 357 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 MCUQ8NE86 351 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 NSMCE1Q8WV22 266 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 SPATA13Q96N96 652 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TMEM209Q96SK2 561 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 HERC2P3Q9BVR0 1158 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TKTL2Q9H0I9 626 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 SPG21Q9NZD8 308 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 SENP1Q9P0U3 644 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TRHDEQ9UKU6 1024 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 MAFFQ9ULX9 164 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 CLUHO75153 1309 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 EXOC1LA0A1B0GW35 172 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 SMIM23A6NLE4 172 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 H0YGN5 161 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 CPP00450 1065 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 OR4Q2P0C623 313 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 SRGAP2BP0DMP2 458 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 ERCC2P18074 760 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TFE3P19532 575 aaPredicted RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 EPHB2P29323 1055 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 CHKAP35790 457 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 GLUD2P49448 558 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 ZNF33AQ06730 810 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 AP1B1Q10567 949 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 PLD1Q13393 1074 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 BTG3Q14201 252 aaPredicted RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 KYNUQ16719 465 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 TTMPQ5BVD1 217 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 LGSNQ5TDP6 509 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 KCTD16Q68DU8 428 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 NCBP2-AS2Q69YL0 99 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 MFSD5Q6N075 450 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 ZBED8Q8IZ13 594 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 STKLD1Q8NE28 680 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 OR2W6PQ8NHA6 318 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 UHMK1Q8TAS1 419 aaKnown RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 OVCA2Q8WZ82 227 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 SELENOSQ9BQE4 189 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 RHOBTB2Q9BYZ6 727 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 NACA2Q9H009 215 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS50-205ENST00000441602 ETNK2Q9NVF9 386 aa6.22□□□□□ -1.41
VPS50-205ENST00000441602 DNAJC17Q9NVM6 304 aaKnown RBP6.22□□□□□ -1.41
VPS50-205ENST00000441602 MARCH5Q9NX47 278 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms