RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 E9PBE3 544 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 KLHL41O60662 606 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 FBXO21O94952 628 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 LSM8O95777 96 aaKnown RBP20.9■□□□□ 0.94
SHOX2-203ENST00000441443 COX4I1P13073 169 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 SERPINB8P50452 374 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 PSMC1P62191 440 aaKnown RBP20.9■□□□□ 0.94
SHOX2-203ENST00000441443 RAB6CQ53S08 254 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 DEPDC1BQ8WUY9 529 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 NLRP4Q96MN2 994 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 IMPG2Q9BZV3 1241 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 RAB6CQ9H0N0 254 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 CISHQ9NSE2 258 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 ARHGAP28Q9P2N2 729 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
SHOX2-203ENST00000441443 CYTH4Q9UIA0 394 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 ARHGAP10A1A4S6 786 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 NFKBIEO00221 500 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 ZBTB14O43829 449 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 BAG6P46379 1132 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 CDKL1Q00532 357 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 LRRC8BQ6P9F7 803 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 KLHL35Q6PF15 583 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 C10orf107Q8IVU9 208 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 HEY1Q9Y5J3 304 aa20.9■□□□□ 0.94
SHOX2-203ENST00000441443 TRDMT1O14717 391 aaKnown RBP20.89■□□□□ 0.94
SHOX2-203ENST00000441443 AIM2O14862 343 aa20.89■□□□□ 0.94
SHOX2-203ENST00000441443 CSDE1O75534 798 aaKnown RBP20.89■□□□□ 0.94
SHOX2-203ENST00000441443 RNF148Q8N7C7 305 aa20.89■□□□□ 0.94
SHOX2-203ENST00000441443 SORT1Q99523 831 aa20.89■□□□□ 0.94
SHOX2-203ENST00000441443 TARS2Q9BW92 718 aaKnown RBP20.89■□□□□ 0.94
SHOX2-203ENST00000441443 ARHGEF38Q9NXL2 777 aa20.89■□□□□ 0.94
SHOX2-203ENST00000441443 ARHGAP26Q9UNA1 814 aa20.89■□□□□ 0.94
SHOX2-203ENST00000441443 JAK3P52333 1124 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 CDH6P55285 790 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 NOMO1Q15155 1222 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 RARS2Q5T160 578 aaKnown RBP20.89■□□□□ 0.93
SHOX2-203ENST00000441443 SH3PXD2AQ5TCZ1 1133 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 AGR3Q8TD06 166 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 PPP4R1Q8TF05 950 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 KCNK16Q96T55 309 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 MSTO1Q9BUK6 570 aa20.89■□□□□ 0.93
SHOX2-203ENST00000441443 C6orf203Q9P0P8 240 aaPredicted RBP20.89■□□□□ 0.93
SHOX2-203ENST00000441443 TTC36A6NLP5 189 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 SUPT3HO75486 399 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CD19P15391 556 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 RBL1P28749 1068 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 MYL6P60660 151 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CYTH1Q15438 398 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 MTERF2Q49AM1 385 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 WDR78Q5VTH9 848 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 NIPA1Q7RTP0 329 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF554Q86TJ5 538 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 AHI1Q8N157 1196 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 RIN3Q8TB24 985 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 RAB26Q9ULW5 256 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 PCDHA10Q9Y5I2 948 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 FAM58BPP0C7Q3 252 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CDH2P19022 906 aaPredicted RBP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 ADORA2AP29274 412 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 GABRB2P47870 512 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 SULT2A1Q06520 285 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 ORC1Q13415 861 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CMASQ8NFW8 434 aaPredicted RBP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 OXCT2Q9BYC2 517 aaPredicted RBP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF696Q9H7X3 374 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 USP18Q9UMW8 372 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 SSX2IPQ9Y2D8 614 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF711Q9Y462 761 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 BACE1P56817 501 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 PCLAFQ15004 111 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 DIS3LQ8TF46 1054 aaKnown RBP20.88■□□□□ 0.93
SHOX2-203ENST00000441443 PEBP4Q96S96 227 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CGRRF1Q99675 332 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 CEPT1Q9Y6K0 416 aa20.88■□□□□ 0.93
SHOX2-203ENST00000441443 SERPINB5P36952 375 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 GRIA1P42261 906 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 KRT76Q01546 638 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 PLOD1Q02809 727 aaPredicted RBP20.87■□□□□ 0.93
SHOX2-203ENST00000441443 LILRA2Q8N149 483 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 TMEM143Q96AN5 459 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 TMIGD2Q96BF3 282 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 SIKE1Q9BRV8 207 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 PAK5Q9P286 719 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 DKC1O60832 514 aaKnown RBP eCLIP20.87■□□□□ 0.93
SHOX2-203ENST00000441443 NELFEP18615 380 aaKnown RBP20.87■□□□□ 0.93
SHOX2-203ENST00000441443 EIF4BP23588 611 aaKnown RBP20.87■□□□□ 0.93
SHOX2-203ENST00000441443 NUDT2P50583 147 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 ENPEPQ07075 957 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 UBR7Q8N806 425 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 IRGQQ8WZA9 623 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 LENG8Q96PV6 779 aaPredicted RBP20.87■□□□□ 0.93
SHOX2-203ENST00000441443 FBXO40Q9UH90 709 aa20.87■□□□□ 0.93
SHOX2-203ENST00000441443 F5H423 210 aaPredicted RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF195O14628 629 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ADCY6O43306 1168 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms