RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NCF2P19878 526 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 BCAP31P51572 246 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 CD300CQ08708 224 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 BMPR2Q13873 1038 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 C6orf183Q5T699 404 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 ZBTB46Q86UZ6 589 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 GPC2Q8N158 579 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PPM1NQ8N819 430 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 ZNF668Q96K58 619 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 POLR3FQ9H1D9 316 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 ADAMTS5Q9UNA0 930 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 APOBEC2Q9Y235 224 aaKnown RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 FAM32AQ9Y421 112 aaKnown RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 K7EPI3 171 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 OXSR1O95747 527 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 NSFP46459 744 aaKnown RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 GDF10P55107 478 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 TEX44Q53QW1 395 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PPP6R3Q5H9R7 873 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 FRMD7Q6ZUT3 714 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 C12orf42Q96LP6 360 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 TMEM63AO94886 807 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 ELK3P41970 407 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PTP4A2Q12974 167 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 STX3Q13277 289 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 LZTR1Q8N653 840 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 TAS1R2Q8TE23 839 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 HAUS8Q9BT25 410 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PCDH9Q9HC56 1237 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 XAB2Q9HCS7 855 aaKnown RBP17.3■□□□□ 0.36
PMS1-213ENST00000441310 CYP26B1Q9NR63 512 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 SLC38A7Q9NVC3 462 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 EBF1Q9UH73 591 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 ITGB1BP2Q9UKP3 347 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 DNAJC16Q9Y2G8 782 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 PLLPQ9Y342 182 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 SSC5DA1L4H1 1573 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 SIN3BO75182 1162 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 STBD1O95210 358 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 TOP3BO95985 862 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 PGK2P07205 417 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 NUP107P57740 925 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 CLVS1Q8IUQ0 354 aaPredicted RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 PDIK1LQ8N165 341 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 BIRC8Q96P09 236 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 GPATCH1Q9BRR8 931 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 XPO7Q9UIA9 1087 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 RBMX2Q9Y388 322 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 FARP1Q9Y4F1 1045 aaPredicted RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 NFASCO94856 1347 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 ZNFX1Q9P2E3 1918 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 KBTBD13C9JR72 458 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 ZNF23P17027 643 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 ACOT2P49753 483 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 STXBP2Q15833 593 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 THOC7Q6I9Y2 204 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 TMEM214Q6NUQ4 689 aaKnown RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 DCDC5Q6ZRR9 648 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 SLC7A5P1Q8MH63 180 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 SLC44A1Q8WWI5 657 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
PMS1-213ENST00000441310 SLITRK1Q96PX8 696 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 NEURL2Q9BR09 285 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 TRPC7Q9HCX4 862 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
PMS1-213ENST00000441310 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 TLR3O15455 904 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 KLHL2O95198 593 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 PSMC3P17980 439 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 ACADVLP49748 655 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 CDH15P55291 814 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 BASP1P80723 227 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 NRF1Q16656 503 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 WDR75Q8IWA0 830 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 HELQQ8TDG4 1101 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 TFB1MQ8WVM0 346 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 AVENQ9NQS1 362 aaPredicted RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 CSADQ9Y600 493 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 BRCA1P38398 1863 aaKnown RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 FBXO21O94952 628 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 ZBTB11O95625 1053 aaPredicted RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 UNGP13051 313 aaPredicted RBP17.28■□□□□ 0.36
PMS1-213ENST00000441310 IGBP1P78318 339 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 ADGRE1Q14246 886 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 ABHD15Q6UXT9 468 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 POLNQ7Z5Q5 900 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 CENPSQ8N2Z9 138 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 CFAP36Q96G28 342 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 SNX27Q96L92 541 aa17.28■□□□□ 0.36
PMS1-213ENST00000441310 KIAA1522Q9P206 1035 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms