RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 ACBD3Q9H3P7 528 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 CYP4F11Q9HBI6 524 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 OLA1Q9NTK5 396 aaKnown RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 ARHGEF38Q9NXL2 777 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 OR12D3Q9UGF7 316 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 HPCAL4Q9UM19 191 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 MAGED2Q9UNF1 606 aaPredicted RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 H7C0C1 242 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 MSI1O43347 362 aaKnown RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 SEC24AO95486 1093 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 ATP2A2P16615 1042 aaKnown RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 ATP5OP48047 213 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 HCAR3P49019 387 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 CAV1Q03135 178 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 PPP2R5DQ14738 602 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 EPAS1Q99814 870 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.36■□□□□ 0.85
APTR-204ENST00000440088 FNIP2Q9P278 1114 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 SSX2IPQ9Y2D8 614 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 FAM72CH0Y354 149 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 TLL1O43897 1013 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 RARGP13631 454 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 HSPA9P38646 679 aaKnown RBP20.35■□□□□ 0.85
APTR-204ENST00000440088 TPI1P60174 286 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 DPYSQ14117 519 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 FAM72AQ5TYM5 149 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 FAM72DQ6L9T8 149 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 BZW1Q7L1Q6 419 aaKnown RBP20.35■□□□□ 0.85
APTR-204ENST00000440088 PRUNE1Q86TP1 453 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 FAM72BQ86X60 149 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 ZBP1Q9H171 429 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 OSBPL2Q9H1P3 480 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 MTIF3Q9H2K0 278 aaKnown RBP20.35■□□□□ 0.85
APTR-204ENST00000440088 C10orf88Q9H8K7 445 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 ETNK2Q9NVF9 386 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 TLR6Q9Y2C9 796 aa20.35■□□□□ 0.85
APTR-204ENST00000440088 ETS1P14921 441 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ALDH1A3P47895 512 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 GDF10P55107 478 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 GBE1Q04446 702 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 P3H1Q32P28 736 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 RASIP1Q5U651 963 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 TMC3Q7Z5M5 1100 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 UNC45BQ8IWX7 931 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 FAM71DQ8N9W8 422 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 SP7Q8TDD2 431 aaPredicted RBP20.34■□□□□ 0.85
APTR-204ENST00000440088 HAPLN3Q96S86 360 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
APTR-204ENST00000440088 CFAP69A5D8W1 941 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 TP73O15350 636 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ZDHHC11BP0C7U3 371 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ZSCAN5DPP0CG00 497 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 CSH1P0DML2 217 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 CSH2P0DML3 217 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 CTSAP10619 480 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 SLC2A3P11169 496 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ELF1P32519 619 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ITGA8P53708 1063 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 GPS1Q13098 491 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 XRCC4Q13426 336 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 KLHL23Q8NBE8 558 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 TSEN2Q8NCE0 465 aaKnown RBP20.34■□□□□ 0.85
APTR-204ENST00000440088 LBHD1Q9BQE6 289 aaPredicted RBP20.34■□□□□ 0.85
APTR-204ENST00000440088 DTLQ9NZJ0 730 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ANAPC5Q9UJX4 755 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 ZMYND8Q9ULU4 1186 aaPredicted RBP20.34■□□□□ 0.85
APTR-204ENST00000440088 MAFFQ9ULX9 164 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 YIPF1Q9Y548 306 aa20.34■□□□□ 0.85
APTR-204ENST00000440088 BCLAF3A2AJT9 711 aaKnown RBP20.33■□□□□ 0.85
APTR-204ENST00000440088 TEX28O15482 410 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 LILRB3O75022 631 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 MAP3K6O95382 1288 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 DHX9Q08211 1270 aaKnown RBP20.33■□□□□ 0.85
APTR-204ENST00000440088 EFEMP1Q12805 493 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 SLC10A2Q12908 348 aaPredicted RBP20.33■□□□□ 0.85
APTR-204ENST00000440088 IZUMO3Q5VZ72 239 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 PDZD8Q8NEN9 1154 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 OVCA2Q8WZ82 227 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 RXFP1Q9HBX9 757 aa20.33■□□□□ 0.85
APTR-204ENST00000440088 PRRG1O14668 218 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 NDC80O14777 642 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 DCLK1O15075 740 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 CA8P35219 290 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 C10orf120Q5SQS8 335 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 CDKL3Q8IVW4 592 aaPredicted RBP20.32■□□□□ 0.84
APTR-204ENST00000440088 FAM53CQ9NYF3 392 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 DNALI1O14645 258 aaPredicted RBP20.32■□□□□ 0.84
APTR-204ENST00000440088 PAGE1O75459 146 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 LRIG2O94898 1065 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 ERCC2P18074 760 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 TBX4P57082 545 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 GPS2Q13227 327 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 VEPH1Q14D04 833 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 PAFAH1B3Q15102 231 aaKnown RBP20.32■□□□□ 0.84
APTR-204ENST00000440088 RHBDF2Q6PJF5 856 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 TCEAL8Q8IYN2 117 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 SLC39A13Q96H72 371 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 CDK5RAP1Q96SZ6 601 aaKnown RBP20.32■□□□□ 0.84
APTR-204ENST00000440088 SIK2Q9H0K1 926 aa20.32■□□□□ 0.84
APTR-204ENST00000440088 TSPYL1Q9H0U9 437 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms