RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PIK3R2O00459 728 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 TIMM44O43615 452 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 CALCAP01258 141 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 IL12RB1P42701 662 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 GPD2P43304 727 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 IRX4P78413 519 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 FUT11Q495W5 492 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 MPP7Q5T2T1 576 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 DAB2IPQ5VWQ8 1189 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 RABEPKQ7Z6M1 372 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 UNC45BQ8IWX7 931 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 STK32AQ8WU08 396 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 NUSAP1Q9BXS6 441 aaKnown RBP16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 CYP8B1Q9UNU6 501 aa16.96■□□□□ 0.31
SNRPD3-204ENST00000439775 CDX4O14627 284 aaPredicted RBP16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 IRAK2O43187 625 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 MED7O43513 233 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 KRT5P13647 590 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 ITPKAP23677 461 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 HLA-FP30511 346 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 ACADSBP45954 432 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 SLC11A2P49281 568 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 ZNF33AQ06730 810 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 NNTQ13423 1086 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 ZNF234Q14588 700 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 CAMK4Q16566 473 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 TMEM215Q68D42 235 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 SMYD5Q6GMV2 418 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 TRIM65Q6PJ69 517 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 CEP76Q8TAP6 659 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 WFIKKN2Q8TEU8 576 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 AZIN2Q96A70 460 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 TMA16Q96EY4 203 aaKnown RBP16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 TRIM62Q9BVG3 475 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 CIPCQ9C0C6 399 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 SLC6A17Q9H1V8 727 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 PRDM16Q9HAZ2 1276 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 CHMP5Q9NZZ3 219 aa16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 USP36Q9P275 1121 aaKnown RBP16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
SNRPD3-204ENST00000439775 GTPBP10A4D1E9 387 aaKnown RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 TSPAN3O60637 253 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 KCNK5O95279 499 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 FYNP06241 537 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 NCAM1P13591 858 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 KCNA4P22459 653 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 FAM133BQ5BKY9 247 aaKnown RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 KIAA1324Q6UXG2 1013 aaKnown RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 BEND5Q7L4P6 421 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 KIAA0907Q7Z7F0 614 aaPredicted RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 ZNF557Q8N988 423 aaPredicted RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 ERLEC1Q96DZ1 483 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 SERPINB11Q96P15 392 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 MED15Q96RN5 788 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 MKRN2Q9H000 416 aaKnown RBP16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 MIS12Q9H081 205 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 APEX2Q9UBZ4 518 aa16.94■□□□□ 0.3
SNRPD3-204ENST00000439775 SYNCRIPO60506 623 aaKnown RBP16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 PRKCHP24723 683 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 GNA15P30679 374 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 TBX4P57082 545 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 DUOXA1Q1HG43 343 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 PIK3R6Q5UE93 754 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 SERPINA13PQ6UXR4 307 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 SLC41A1Q8IVJ1 513 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 SCUBE3Q8IX30 993 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 AHI1Q8N157 1196 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 DQX1Q8TE96 717 aaKnown RBP16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 ZNF606Q8WXB4 792 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 ZNF419Q96HQ0 510 aaPredicted RBP16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 FCRL2Q96LA5 508 aaPredicted RBP16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 HSPA12BQ96MM6 686 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 SLC4A5Q9BY07 1137 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 ST7Q9NRC1 585 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 GGA2Q9UJY4 613 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 TLR6Q9Y2C9 796 aa16.93■□□□□ 0.3
SNRPD3-204ENST00000439775 MUC22E2RYF6 1773 aaPredicted RBP16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 CNOT1A5YKK6 2376 aaKnown RBP16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 ACSL4O60488 711 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 NDUFS2O75306 463 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 LETM1O95202 739 aaPredicted RBP16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 IGLV3-19P01714 112 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 SERPINF2P08697 491 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 C7P10643 843 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 PABPC1P11940 636 aaKnown RBP16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 ENGP17813 658 aa16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 CSRP1P21291 193 aaKnown RBP16.92■□□□□ 0.3
SNRPD3-204ENST00000439775 PMLP29590 882 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms