RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 POLR3BQ9NW08 1133 aaPredicted RBP18.53■□□□□ 0.56
NCSTN-208ENST00000438008 KIAA1549LQ6ZVL6 1849 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 A0A1B0GTH6 734 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 CYP1A1P04798 512 aaPredicted RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 CHRNB2P17787 502 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 HOXC13P31276 330 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 TIE1P35590 1138 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 NOMO3P69849 1222 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 CDK17Q00537 523 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 FMO1Q01740 532 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 FAM133BQ5BKY9 247 aaKnown RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 TRMT11Q7Z4G4 463 aaKnown RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 ALLCQ8N6M5 410 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 TXNDC5Q8NBS9 432 aaKnown RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 MSANTD4Q8NCY6 345 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 ADAM32Q8TC27 787 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 DDI1Q8WTU0 396 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 SLC20A1Q8WUM9 679 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 TMA16Q96EY4 203 aaKnown RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 DDX50Q9BQ39 737 aaKnown RBP18.52■□□□□ 0.56
NCSTN-208ENST00000438008 EBF1Q9UH73 591 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 HCN2Q9UL51 889 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 DMDP11532 3685 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 MYO15AQ9UKN7 3530 aa18.52■□□□□ 0.56
NCSTN-208ENST00000438008 A0A1W2PQC6 194 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 PRRT4C9JH25 899 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 DAB1O75553 588 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 KLF8O95600 359 aaPredicted RBP18.51■□□□□ 0.55
NCSTN-208ENST00000438008 APBB3O95704 486 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 HOXD9P28356 352 aaPredicted RBP18.51■□□□□ 0.55
NCSTN-208ENST00000438008 PITX1P78337 314 aaPredicted RBP18.51■□□□□ 0.55
NCSTN-208ENST00000438008 CRY1Q16526 586 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 EOGTQ5NDL2 527 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 MPP7Q5T2T1 576 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 PIK3R6Q5UE93 754 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 RNF43Q68DV7 783 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 HEATR6Q6AI08 1181 aaKnown RBP18.51■□□□□ 0.55
NCSTN-208ENST00000438008 TRIM72Q6ZMU5 477 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 CACNA2D4Q7Z3S7 1137 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 XYLT1Q86Y38 959 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 CCDC33Q8N5R6 958 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
NCSTN-208ENST00000438008 HHIPQ96QV1 700 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 MYO6Q9UM54 1294 aa18.51■□□□□ 0.55
NCSTN-208ENST00000438008 SGK1O00141 431 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 HRO43593 1189 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 TSPAN3O60637 253 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 ADAM23O75077 832 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 GRAP2O75791 330 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 SLC6A4P31645 630 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 GBP1P32455 592 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 NOS2P35228 1153 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 DGKEP52429 567 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 TPM4P67936 248 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 NR1I3Q14994 352 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 ZC3H12AQ5D1E8 599 aaKnown RBP18.5■□□□□ 0.55
NCSTN-208ENST00000438008 NAA35Q5VZE5 725 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 NADSYN1Q6IA69 706 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 ZNF513Q8N8E2 541 aaPredicted RBP18.5■□□□□ 0.55
NCSTN-208ENST00000438008 TSTD1Q8NFU3 115 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 CPA5Q8WXQ8 436 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
NCSTN-208ENST00000438008 RRN3Q9NYV6 651 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
NCSTN-208ENST00000438008 ZFHX2Q9C0A1 2572 aaPredicted RBP18.49■□□□□ 0.55
NCSTN-208ENST00000438008 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 AXIN1O15169 862 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 SERPINC1P01008 464 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 APOEP02649 317 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 SLC2A3P11169 496 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 HNRNPLP14866 589 aaKnown RBP eCLIP18.49■□□□□ 0.55
NCSTN-208ENST00000438008 MATKP42679 507 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 PXNP49023 591 aaPredicted RBP18.49■□□□□ 0.55
NCSTN-208ENST00000438008 GEN1Q17RS7 908 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 RFWD3Q6PCD5 774 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 TMEM92Q6UXU6 159 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 ANKS1BQ7Z6G8 1248 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 BAP1Q92560 729 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 NT5C3BQ969T7 300 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 BTN2A3PQ96KV6 586 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 FAM204AQ9H8W3 233 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
NCSTN-208ENST00000438008 ATG2BQ96BY7 2078 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 CCDC172P0C7W6 258 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 UNGP13051 313 aaPredicted RBP18.48■□□□□ 0.55
NCSTN-208ENST00000438008 FERP16591 822 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 MMP8P22894 467 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 NTSR1P30989 418 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 CCR1P32246 355 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 SGSHP51688 502 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 MTA1Q13330 715 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 MS4A13Q5J8X5 152 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 EGFLAMQ63HQ2 1017 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 ARCQ7LC44 396 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.48■□□□□ 0.55
NCSTN-208ENST00000438008 ATP6V0D2Q8N8Y2 350 aa18.48■□□□□ 0.55
NCSTN-208ENST00000438008 GAB3Q8WWW8 586 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms