RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NYAP1Q6ZVC0 841 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 GLT6D1Q7Z4J2 308 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 ATG4AQ8WYN0 398 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 KLF6Q99612 283 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 TBC1D23Q9NUY8 699 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 MYPNQ86TC9 1320 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 LACTBL1A8MY62 500 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 YWHAZP63104 245 aaKnown RBP16.26■□□□□ 0.19
PTPN13-204ENST00000436978 TMEM159Q96B96 161 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 DTNBP1Q96EV8 351 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 YIPF3Q9GZM5 350 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 OSGEPL1Q9H4B0 414 aa16.26■□□□□ 0.19
PTPN13-204ENST00000436978 CCDC142Q17RM4 750 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 CHMP1BQ7LBR1 199 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 EPS8L3Q8TE67 593 aaKnown RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 O00370 1275 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 CALB2P22676 271 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 USP45Q70EL2 814 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF571Q7Z3V5 609 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 STK40Q8N2I9 435 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 RBM22Q9NW64 420 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 A0A087X1B8 175 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ATP5BP06576 529 aaKnown RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 AKAP5P24588 427 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 TUBP50607 506 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 PTENP60484 403 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 DNAJC3Q13217 504 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF544Q6NX49 715 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 BRSK2Q8IWQ3 736 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 MYH3P11055 1940 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 SLITRK3O94933 977 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 JCHAINP01591 159 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 SLC16A1P53985 500 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 RNF103O00237 685 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ACOX1Q15067 660 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 FUT11Q495W5 492 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 DACT2Q5SW24 774 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 MTSS1LQ765P7 747 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 PANX3Q96QZ0 392 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 VAT1Q99536 393 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 NMRAL1Q9HBL8 299 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 SKAP2O75563 359 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-204ENST00000436978 VHLP40337 213 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 NTRK3Q16288 839 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 DNAJC9Q8WXX5 260 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 POPDC2Q9HBU9 364 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 IRAK1BP1Q5VVH5 260 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 ASB2Q96Q27 587 aa16.25■□□□□ 0.19
PTPN13-204ENST00000436978 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 CD151P48509 253 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 DDX39BQ13838 428 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 CELF3Q5SZQ8 465 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 KCNMB4Q86W47 210 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 PORCNQ9H237 461 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 EPS8L2Q9H6S3 715 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 ENOPH1Q9UHY7 261 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 GRK4P32298 578 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 HPCAL1P37235 193 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 PIK3CGP48736 1102 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 SLC6A3Q01959 620 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 KRT6AP02538 564 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 KRT6BP04259 564 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 KRT6CP48668 564 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 TTC33Q6PID6 262 aaPredicted RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 BNC2Q6ZN30 1099 aaPredicted RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 HTR3CQ8WXA8 447 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 CCT7Q99832 543 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 PDPK2PQ6A1A2 396 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 LAYNQ6UX15 382 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 APLFQ8IW19 511 aaPredicted RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 CYP4Z2PQ8N1L4 340 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 NOA1Q8NC60 698 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 CAPN10Q9HC96 672 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 MTM1Q13496 603 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 TARSP26639 723 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 MYH11P35749 1972 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 TRAV19A0A0A6YYK7 116 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 PSEN1P49768 467 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 MMRN1Q13201 1228 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 FNDC3BQ53EP0 1204 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 LENG9Q96B70 501 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms