RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 HAS1Q92839 578 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 SYT11Q9BT88 431 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
GARNL3-205ENST00000435213 HOXD1Q9GZZ0 328 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 VPS45Q9NRW7 570 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 PPP1R14DQ9NXH3 145 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 MAPRE3Q9UPY8 281 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 CHKBQ9Y259 395 aa7.55□□□□□ -1.2
GARNL3-205ENST00000435213 MYH14Q7Z406 1995 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SPATA31A6Q5VVP1 1343 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 IGSF9BQ9UPX0 1349 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 HOXC11O43248 304 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NDUFA2O43678 99 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CBX6O95503 412 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 KRT18P05783 430 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ITIH1P19827 911 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 FGFR4P22455 802 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 RRM2P31350 389 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NOVP48745 357 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SCNN1DP51172 638 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 AP2S1P53680 142 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 MAPK6Q16659 721 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 DCAF17Q5H9S7 520 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ITPRIPL1Q6GPH6 555 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 TATDN1Q6P1N9 297 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PRELID2Q8N945 189 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PSD4Q8NDX1 1056 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 KCTD4Q8WVF5 259 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 C18orf8Q96DM3 657 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ZNF641Q96N77 438 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 GAL3ST1Q99999 423 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 BTBD2Q9BX70 525 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CPVLQ9H3G5 476 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 HPS4Q9NQG7 708 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 FBXO40Q9UH90 709 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 GMEB2Q9UKD1 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PCDHGA10Q9Y5H3 936 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ZNF701M0R085 212 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ACOX3O15254 700 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 MAN1A2O60476 641 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NR4A1P22736 598 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLCO1A2P46721 670 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CLK2P49760 499 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 RGS7P49802 495 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NKX2-5P52952 324 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC12A3P55017 1021 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ESRRGP62508 458 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 RPP38P78345 283 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ASPRV1Q53RT3 343 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SEL1L2Q5TEA6 688 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 C16orf86Q6ZW13 317 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC9A6Q92581 669 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 MROQ9BYG7 248 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 TRIM8Q9BZR9 551 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PLEKHA5Q9HAU0 1116 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 AVENQ9NQS1 362 aaPredicted RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 PIH1D1Q9NWS0 290 aaKnown RBP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 GDAP2Q9NXN4 497 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NKIRAS1Q9NYS0 192 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.54□□□□□ -1.2
GARNL3-205ENST00000435213 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 LY75O60449 1722 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 COL24A1Q17RW2 1714 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 FRMPD4Q14CM0 1322 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SPATA31A1Q5TZJ5 1347 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ADGRA3Q8IWK6 1321 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 C1orf232A0A0U1RR37 186 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 OR5K3A6NET4 321 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 POTECB2RU33 542 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 RAD51BO15315 384 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 NUAK1O60285 661 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A9O60656 530 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 TCEA3O75764 348 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 CD4P01730 458 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 THRAP10827 490 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SFTPCP11686 197 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A6P19224 532 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A1P22309 533 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A4P22310 534 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A3P35503 534 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 UGT1A5P35504 534 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 SLC26A2P50443 739 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 COPAP53621 1224 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 STRN3Q13033 797 aa7.54□□□□□ -1.2
GARNL3-205ENST00000435213 ITGADQ13349 1161 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms