RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 UNC5BQ8IZJ1 945 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ADCY4Q8NFM4 1077 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 LRTOMTQ8WZ04 291 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 RCN3Q96D15 328 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GBA3Q9H227 469 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 EHD1Q9H4M9 534 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 MRPL47Q9HD33 250 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 SMYD2Q9NRG4 433 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PIH1D1Q9NWS0 290 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 KIAA1522Q9P206 1035 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PCDHB4Q9Y5E5 795 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TAF1P21675 1872 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 C10orf71Q711Q0 1435 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 hCG_1818297A0A087WSY0 165 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TPST1O60507 370 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 P4HBP07237 508 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 KCNJ8Q15842 424 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TFDP3Q5H9I0 405 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TTC33Q6PID6 262 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PADI6Q6TGC4 694 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 RNF19BQ6ZMZ0 732 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ATXN7L3BQ96GX2 97 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 HSD17B14Q9BPX1 270 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 SLC4A5Q9BY07 1137 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ZC3H12CQ9C0D7 883 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PCDHAC1Q9H158 963 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TBC1D22BQ9NU19 505 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 HESX1Q9UBX0 185 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 A0A1B0GUL6 1792 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 WBP4O75554 376 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CRKLP46109 303 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PGS1Q32NB8 556 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 MGAT5BQ3V5L5 792 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CCDC14Q49A88 953 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 POTEAQ6S8J7 498 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 NPNTQ6UXI9 565 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 RFX6Q8HWS3 928 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 KLHL32Q96NJ5 620 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 BIRC8Q96P09 236 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf112Q9NSG2 853 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF358Q9NW07 568 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TUBA8Q9NY65 449 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 STK39Q9UEW8 545 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ZNHIT2Q9UHR6 403 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 COL4A1P02462 1669 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GOLGA8TH3BQL2 631 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ZBTB7AO95365 584 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 MYCLP12524 364 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CEACAM7Q14002 265 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CYP4A22Q5TCH4 519 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 BSPRYQ5W0U4 402 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 DARS2Q6PI48 645 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 HAUS6Q7Z4H7 955 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PCGF5Q86SE9 256 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TTLL6Q8N841 843 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 TBC1D15Q8TC07 691 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PDCD6IPQ8WUM4 868 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 FAM20AQ96MK3 541 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 SERPINI1Q99574 410 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 POLR1BQ9H9Y6 1135 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 AVENQ9NQS1 362 aaPredicted RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ITGB1BP2Q9UKP3 347 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 KRBA1A5PL33 1030 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 SAC3D1A6NKF1 404 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CFAP99D6REC4 459 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 H3BNH8 94 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 APRTP07741 180 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CYP2C9P11712 490 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 YAP1P46937 504 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 IREB2P48200 963 aaKnown RBP7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ALDH3B2P48448 385 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CCDC153Q494R4 210 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 C10orf107Q8IVU9 208 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ADGRF2Q8IZF7 708 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 DSELQ8IZU8 1212 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 NAT16Q8N8M0 369 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 CATSPER1Q8NEC5 780 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 ACCSQ96QU6 501 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 PCDH12Q9NPG4 1184 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 OLAHQ9NV23 265 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GIN1Q9NXP7 522 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 FZD1Q9UP38 647 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 GINS2Q9Y248 185 aa7.67□□□□□ -1.18
CPSF6-202ENST00000435070 C1orf167Q5SNV9 1468 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MAFGO15525 162 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 GNAO1P09471 354 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ATXN8OSP0DMR3 200 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF12P17014 697 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ART3Q13508 389 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CCDC142Q17RM4 750 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CASC4Q6P4E1 433 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 HACE1Q8IYU2 909 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 KBTBD7Q8WVZ9 684 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MBOAT7Q96N66 472 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 OR52B2Q96RD2 323 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 LXNQ9BS40 222 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms