RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ADAM33Q9BZ11 813 aa19.1■□□□□ 0.65
HLA-F-220ENST00000434407 PRMT8Q9NR22 394 aaPredicted RBP19.1■□□□□ 0.65
HLA-F-220ENST00000434407 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.1■□□□□ 0.65
HLA-F-220ENST00000434407 ADAM22Q9P0K1 906 aa19.1■□□□□ 0.65
HLA-F-220ENST00000434407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.1■□□□□ 0.65
HLA-F-220ENST00000434407 TCRBV5S1A1TA0A578 114 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 KCNU1A8MYU2 1149 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 CHURC1-FNTBB4DL54 471 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 KAT7O95251 611 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 CALB1P05937 261 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 CISD3P0C7P0 127 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 TNFAIP3P21580 790 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 GBP1P32455 592 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 FLT3P36888 993 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 GRIA2P42262 883 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 SLC11A2P49281 568 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 PTPN5P54829 565 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 KLHL30Q0D2K2 578 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 ANGPT1Q15389 498 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 ZC3H12AQ5D1E8 599 aaKnown RBP19.09■□□□□ 0.65
HLA-F-220ENST00000434407 SPECC1LQ69YQ0 1117 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 NADSYN1Q6IA69 706 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 ACAD10Q6JQN1 1059 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 VSTM4Q8IW00 320 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 NAT16Q8N8M0 369 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 XPO6Q96QU8 1125 aaKnown RBP19.09■□□□□ 0.65
HLA-F-220ENST00000434407 TMEM51Q9NW97 253 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 SPATA6Q9NWH7 488 aaPredicted RBP19.09■□□□□ 0.65
HLA-F-220ENST00000434407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.65
HLA-F-220ENST00000434407 DDIT4Q9NX09 232 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 CALCOCO1Q9P1Z2 691 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 DEC1Q9P2X7 70 aa19.09■□□□□ 0.65
HLA-F-220ENST00000434407 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
HLA-F-220ENST00000434407 FAM170AA1A519 330 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 GOLGA8SH3BPF8 625 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 AP5Z1O43299 807 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PAPSS2O95340 614 aaPredicted RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 APODP05090 189 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SLC2A3P11169 496 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 GZMAP12544 262 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 HNRNPH3P31942 346 aaKnown RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 TNFRSF4P43489 277 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 RNASE9P60153 205 aaKnown RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PPP2R5DQ14738 602 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SLC25A52Q3SY17 297 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PREPLQ4J6C6 727 aaPredicted RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PIK3R6Q5UE93 754 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PPP1R2P3Q6NXS1 205 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 GAS2L3Q86XJ1 694 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SFTPA1Q8IWL2 248 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 CCDC26Q8TAB7 109 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 VCPIP1Q96JH7 1222 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 RBSNQ9H1K0 784 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 FAM204AQ9H8W3 233 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 ARHGEF4Q9NR80 690 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SEPT11Q9NVA2 429 aaKnown RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 TAS2R14Q9NYV8 317 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 PLK2Q9NYY3 685 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 FBXO4Q9UKT5 387 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 STAP1Q9ULZ2 295 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SSUH2Q9Y2M2 353 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 SLC27A6Q9Y2P4 619 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 BZW2Q9Y6E2 419 aaKnown RBP19.08■□□□□ 0.64
HLA-F-220ENST00000434407 DMDP11532 3685 aa19.08■□□□□ 0.64
HLA-F-220ENST00000434407 MYO15AQ9UKN7 3530 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 DDX3XO00571 662 aaKnown RBP eCLIP19.07■□□□□ 0.64
HLA-F-220ENST00000434407 RNF40O75150 1001 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 APOEP02649 317 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 CYBBP04839 570 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 SKILP12757 684 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 TDGF1P13385 188 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 TFE3P19532 575 aaPredicted RBP19.07■□□□□ 0.64
HLA-F-220ENST00000434407 HOXD9P28356 352 aaPredicted RBP19.07■□□□□ 0.64
HLA-F-220ENST00000434407 SLC6A4P31645 630 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 CASP14P31944 242 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 TRIM14Q14142 442 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 ARID5BQ14865 1188 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 MPPE1Q53F39 396 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 MPP7Q5T2T1 576 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 PKN3Q6P5Z2 889 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 MCOLN2Q8IZK6 566 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 TERB1Q8NA31 727 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 C3orf20Q8ND61 904 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 CPLX3Q8WVH0 158 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 BTN2A3PQ96KV6 586 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 IRF2BPLQ9H1B7 796 aa19.07■□□□□ 0.64
HLA-F-220ENST00000434407 DNAJC17Q9NVM6 304 aaKnown RBP19.07■□□□□ 0.64
HLA-F-220ENST00000434407 XPO7Q9UIA9 1087 aaKnown RBP19.07■□□□□ 0.64
HLA-F-220ENST00000434407 DOCK4Q8N1I0 1966 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 GOLGA6L7A0A1B0GV03 622 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 M0QYT0 321 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 TRIM24O15164 1050 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 LAMTOR5O43504 91 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 ENDOD1O94919 500 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 SERPING1P05155 500 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 CCR1P32246 355 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 CXCR3P49682 368 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 CCR3P51677 355 aa19.06■□□□□ 0.64
HLA-F-220ENST00000434407 KDSRQ06136 332 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms