RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 CYP11B1P15538 503 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 USP39Q53GS9 565 aaKnown RBP13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 EGFLAMQ63HQ2 1017 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 OR6B2Q6IFH4 312 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 TMEM92Q6UXU6 159 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 RASSF3Q86WH2 238 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZDHHC17Q8IUH5 632 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 DCLK2Q8N568 766 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 WDTC1Q8N5D0 677 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 LOXL4Q96JB6 756 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 GANQ9H2C0 597 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 BCCIPQ9P287 314 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 CEP192Q8TEP8 1941 aa13.74□□□□□ -0.21
TRAPPC4-202ENST00000434101 CKAP5Q14008 2032 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 DMDP11532 3685 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TCRBV21S2A2A0A5A6 115 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TYW5A2RUC4 315 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 PRRT4C9JH25 899 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 GFRA2O00451 464 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TSPAN3O60637 253 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 LRP3O75074 770 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 LSM8O95777 96 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TRUB2O95900 331 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 HOXB2P14652 356 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZNF18P17022 549 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 PTMSP20962 102 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 HOXD9P28356 352 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 GBP1P32455 592 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 CDH5P33151 784 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 POLR2FP61218 127 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 CDK17Q00537 523 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 UBXN1Q04323 297 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 BYSLQ13895 437 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 NCAPHQ15003 741 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 ELF2Q15723 593 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 ANO6Q4KMQ2 910 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 DCAF6Q58WW2 860 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 MPP7Q5T2T1 576 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 SYPL2Q5VXT5 272 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 FAM160A2Q8N612 972 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 MDGA1Q8NFP4 955 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 NEK11Q8NG66 645 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC39A13Q96H72 371 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 PIWIL1Q96J94 861 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 FCRL2Q96LA5 508 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 BPIFA3Q9BQP9 254 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 FAM207AQ9NSI2 230 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC12A6Q9UHW9 1150 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 PI4KAP42356 2102 aa13.73□□□□□ -0.21
TRAPPC4-202ENST00000434101 TIMM44O43615 452 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 ERBB2P04626 1255 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC2A3P11169 496 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC6A3Q01959 620 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 ARID5AQ03989 594 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 MTA1Q13330 715 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SYCP1Q15431 976 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 PTPN20Q4JDL3 420 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 TAF3Q5VWG9 929 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC26A9Q7LBE3 791 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 KBTBD6Q86V97 674 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 CCDC117Q8IWD4 279 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 DEFB106AQ8N104 65 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 WFIKKN2Q8TEU8 576 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 HMGB4Q8WW32 186 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 ZC3H10Q96K80 434 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SPACA7Q96KW9 195 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SLC2A13Q96QE2 648 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 GABRG3Q99928 467 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 TPSD1Q9BZJ3 242 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
TRAPPC4-202ENST00000434101 FOXD2O60548 495 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms