RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 C1orf210Q8IVY1 113 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 DEFB106AQ8N104 65 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CYP4X1Q8N118 509 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ZNF276Q8N554 614 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TMEM35BQ8NCS4 154 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 RNF214Q8ND24 703 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 SLC30A5Q8TAD4 765 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 DDI1Q8WTU0 396 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 STK32AQ8WU08 396 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 IRGQQ8WZA9 623 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CLDN23Q96B33 292 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ERLEC1Q96DZ1 483 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 PIWIL1Q96J94 861 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 NOX5Q96PH1 765 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CDK15Q96Q40 435 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ERGIC2Q96RQ1 377 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 PNKPQ96T60 521 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 PCDHB18PQ96TA0 734 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 BBS2Q9BXC9 721 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 OSBPL6Q9BZF3 934 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 LHX5Q9H2C1 402 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TSPY26PQ9H489 355 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ZDHHC4Q9NPG8 344 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 SPHK2Q9NRA0 654 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 OLA1Q9NTK5 396 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 SEPT11Q9NVA2 429 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 C2orf42Q9NWW7 574 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 IFNKQ9P0W0 207 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 AGO1Q9UL18 857 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 WASF2Q9Y6W5 498 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 SPTBN5Q9NRC6 3674 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 XIRP2A4UGR9 3374 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 UNC80Q8N2C7 3258 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 A0A1B0GTH6 734 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TTC24A2A3L6 582 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TBC1D3BA6NDS4 549 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 LRRC53A6NM62 1247 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TMCO5BA8MYB1 307 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 K7EQS6 105 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 LAMTOR5O43504 91 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TRUB2O95900 331 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 MOCS2O96007 188 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 ADH1CP00326 375 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SKILP12757 684 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TYRP14679 529 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 DRD1P21728 446 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 CXCL12P48061 93 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 PXNP49023 591 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 HARS2P49590 506 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TBX4P57082 545 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 JAM2P57087 298 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SNX16P57768 344 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 PITX1P78337 314 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SATB1Q01826 763 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 CDR2Q01850 454 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 MESP2Q0VG99 397 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 NME3Q13232 169 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 LRRC32Q14392 662 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 GAS6Q14393 721 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 GAB4Q2WGN9 574 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 PTPN20Q4JDL3 420 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 TMEM196Q5HYL7 178 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 EFHC1Q5JVL4 640 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 NAA35Q5VZE5 725 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 HEATR6Q6AI08 1181 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 PKN3Q6P5Z2 889 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 LRSAM1Q6UWE0 723 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SFTPA1Q8IWL2 248 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 MAML2Q8IZL2 1156 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SCML4Q8N228 414 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 CCDC33Q8N5R6 958 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 SNIP1Q8TAD8 396 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 DQX1Q8TE96 717 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 IPO4Q8TEX9 1081 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 DDX1Q92499 740 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 EZH1Q92800 747 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 RNF34Q969K3 372 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 EXOC4Q96A65 974 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 OTUB2Q96DC9 234 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 C18orf8Q96DM3 657 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 FAM122AQ96E09 287 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 XPO6Q96QU8 1125 aaKnown RBP6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 PRRX2Q99811 253 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 AGPAT1Q99943 283 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 DCLK3Q9C098 648 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 POPDC2Q9HBU9 364 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 STIM2Q9P246 746 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 CLEC4EQ9ULY5 219 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 DOLKQ9UPQ8 538 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 ZNF510Q9Y2H8 683 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 CEP83Q9Y592 693 aa6.01□□□□□ -1.45
HMGB3P24-201ENST00000433260 M0QYT0 321 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 SIAH2O43255 324 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 ATG13O75143 517 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 TULP3O75386 442 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 KAT7O95251 611 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 GJB6O95452 261 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 CAVIN2O95810 425 aa6□□□□□ -1.45
HMGB3P24-201ENST00000433260 CYP1A1P04798 512 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms