RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 KCTD13Q8WZ19 329 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 NDRG1Q92597 394 aaKnown RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 EDEM1Q92611 657 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 SIPA1Q96FS4 1042 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 TOE1Q96GM8 510 aaKnown RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 MKRN2Q9H000 416 aaKnown RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 CD93Q9NPY3 652 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 CNGB3Q9NQW8 809 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 ITM2CQ9NQX7 267 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 ABCC13Q9NSE7 274 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 USP36Q9P275 1121 aaKnown RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 WASF3Q9UPY6 502 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 NFE2L3Q9Y4A8 694 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 YJEFN3A6XGL0 299 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 E7ENQ6 273 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 O00370 1275 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 LATS1O95835 1130 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 PAEPP09466 180 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 PPP1R2P41236 205 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 PMS1P54277 932 aaKnown RBP16.9■□□□□ 0.3
ACTB-205ENST00000432588 CETN1Q12798 172 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 LRMPQ12912 555 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 HNRNPDQ14103 355 aaKnown RBP16.9■□□□□ 0.3
ACTB-205ENST00000432588 ADGRF1Q5T601 910 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 SCML4Q8N228 414 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 SCNM1Q9BWG6 230 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
ACTB-205ENST00000432588 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
ACTB-205ENST00000432588 WSB2Q9NYS7 404 aaPredicted RBP16.9■□□□□ 0.3
ACTB-205ENST00000432588 TMEM8BA6NDV4 472 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 C1QTNF9BB2RNN3 333 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 EPHX1P07099 455 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 C1QTNF9P0C862 333 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 NCAM1P13591 858 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 LCP1P13796 627 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 SPINK2P20155 84 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 HOXD9P28356 352 aaPredicted RBP16.89■□□□□ 0.29
ACTB-205ENST00000432588 FMO5P49326 533 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 TPMTP51580 245 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 SLC14A1Q13336 389 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 STILQ15468 1287 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 TMEM270Q6UE05 265 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 LCLAT1Q6UWP7 414 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 WFIKKN2Q8TEU8 576 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 DNASE2BQ8WZ79 361 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
ACTB-205ENST00000432588 DHTKD1Q96HY7 919 aaPredicted RBP16.89■□□□□ 0.29
ACTB-205ENST00000432588 CEP63Q96MT8 703 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 NUP58Q9BVL2 599 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 STOML2Q9UJZ1 356 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 CLEC4EQ9ULY5 219 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 PCDHB4Q9Y5E5 795 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 IGF2RP11717 2491 aa16.89■□□□□ 0.29
ACTB-205ENST00000432588 A0A1B0GTW7 788 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 SPAARA0A1B0GVQ0 90 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 H0Y626 953 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 PMM2O15305 246 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 TSPAN3O60637 253 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 TRIM16O95361 564 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 PRKCHP24723 683 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 DAOAP59103 153 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 NUCB2P80303 420 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 BECN1Q14457 450 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 FNDC3BQ53EP0 1204 aaKnown RBP16.88■□□□□ 0.29
ACTB-205ENST00000432588 PPM1KQ8N3J5 372 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 UBR7Q8N806 425 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 OR2I1PQ8NGU4 316 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 SORCS1Q8WY21 1168 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 ERCC4Q92889 916 aaPredicted RBP16.88■□□□□ 0.29
ACTB-205ENST00000432588 CACNA1EQ15878 2313 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 PCDH15Q96QU1 1955 aa16.88■□□□□ 0.29
ACTB-205ENST00000432588 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 MSI1O43347 362 aaKnown RBP16.87■□□□□ 0.29
ACTB-205ENST00000432588 TOP3BO95985 862 aaKnown RBP16.87■□□□□ 0.29
ACTB-205ENST00000432588 IGLV3-19P01714 112 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 CD59P13987 128 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 MAOBP27338 520 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 HLA-FP30511 346 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 SLC11A2P49281 568 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 COPAP53621 1224 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 CNGA2Q16280 664 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 PKDCCQ504Y2 493 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 NUGGCQ68CJ6 796 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 TMEM215Q68D42 235 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 MSANTD2Q6P1R3 559 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
ACTB-205ENST00000432588 ZNF557Q8N988 423 aaPredicted RBP16.87■□□□□ 0.29
ACTB-205ENST00000432588 KDF1Q8NAX2 398 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms