RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ATXN2LQ8WWM7 1075 aaKnown RBP20.22■□□□□ 0.83
VRK2-205ENST00000432057 LGMNQ99538 433 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 COLEC11Q9BWP8 271 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 PRDM16Q9HAZ2 1276 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 ETNK1Q9HBU6 452 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 PRDM4Q9UKN5 801 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 NUP205Q92621 2012 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 SF3B1O75533 1304 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■■■■■ 172.3
VRK2-205ENST00000432057 ENPP3O14638 875 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 TRAPPC3O43617 180 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 GCATO75600 419 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 METTL18O95568 372 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 GRIK1P39086 918 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 ELK3P41970 407 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 SLC5A3P53794 718 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 EFTUD2Q15029 972 aaKnown RBP eCLIP20.22■□□□□ 0.839e-7■■■■■ 40
VRK2-205ENST00000432057 VSTM1Q6UX27 236 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 PPP1R21Q6ZMI0 780 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 IGDCC3Q8IVU1 814 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 DQX1Q8TE96 717 aaKnown RBP20.22■□□□□ 0.83
VRK2-205ENST00000432057 CENPTQ96BT3 561 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 ZCWPW1Q9H0M4 648 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 ABI2Q9NYB9 513 aaPredicted RBP20.22■□□□□ 0.83
VRK2-205ENST00000432057 SNX10Q9Y5X0 201 aa20.22■□□□□ 0.83
VRK2-205ENST00000432057 GREB1Q4ZG55 1949 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 HACD1B0YJ81 288 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 DCLK1O15075 740 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 AVILO75366 819 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 PHBP35232 272 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 CXCR3P49682 368 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 TPI1P60174 286 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 PAFAH1B3Q15102 231 aaKnown RBP20.21■□□□□ 0.83
VRK2-205ENST00000432057 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 AGGF1Q8N302 714 aaeCLIP20.21■□□□□ 0.83
VRK2-205ENST00000432057 HTR3CQ8WXA8 447 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 MRRFQ96E11 262 aaKnown RBP20.21■□□□□ 0.83
VRK2-205ENST00000432057 FAM107BQ9H098 131 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 HCSTQ9UBK5 93 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 RSPH14Q9UHP6 348 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 RABGEF1Q9UJ41 708 aa20.21■□□□□ 0.83
VRK2-205ENST00000432057 C5orf60A6NFR6 353 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TNFRSF10BO14763 440 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TADA2AO75478 443 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 OAZ2O95190 189 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 F9P00740 461 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 APRTP07741 180 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 COL6A1P12109 1028 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 MAGEA6P43360 314 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 PRKD1Q15139 912 aaPredicted RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 ARL13BQ3SXY8 428 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 C4orf22Q6V702 233 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 ARHGEF18Q6ZSZ5 1173 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 BZW1Q7L1Q6 419 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 TDRPQ86YL5 185 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 SCN4BQ8IWT1 228 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TP53INP2Q8IXH6 220 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 PALM2Q8IXS6 379 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 SRRM1Q8IYB3 904 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 VPS52Q8N1B4 723 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 ZNF473Q8WTR7 871 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 MAML1Q92585 1016 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 CCT8L2Q96SF2 557 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TKTL2Q9H0I9 626 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 ELAC1Q9H777 363 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 INTS9Q9NV88 658 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TMEM120BA0PK00 339 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 GMNCA6NCL1 334 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 PQBP1O60828 265 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 ERCC2P18074 760 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 YWHAGP61981 247 aaKnown RBP eCLIP20.2■□□□□ 0.82
VRK2-205ENST00000432057 AP1B1Q10567 949 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 MTFR1Q15390 333 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
VRK2-205ENST00000432057 C3orf62Q6ZUJ4 267 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 FBF1Q8TES7 1133 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 CASD1Q96PB1 797 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 DEFB118Q96PH6 123 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 WDCPQ9H6R7 721 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 TEX264Q9Y6I9 313 aa20.2■□□□□ 0.82
VRK2-205ENST00000432057 BRAFP15056 766 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 PGFP49763 221 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 DENND5BQ6ZUT9 1274 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 TADA2BQ86TJ2 420 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 CAND1Q86VP6 1230 aaKnown RBP20.19■□□□□ 0.82
VRK2-205ENST00000432057 DCP1BQ8IZD4 617 aaKnown RBP20.19■□□□□ 0.82
VRK2-205ENST00000432057 SEPT8Q92599 483 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 SEZ6LQ9BYH1 1024 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 PAK6Q9NQU5 681 aaPredicted RBP20.19■□□□□ 0.82
VRK2-205ENST00000432057 ADAM28Q9UKQ2 775 aa20.19■□□□□ 0.82
VRK2-205ENST00000432057 A0A0A0MRY4 1105 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 F5H423 210 aaPredicted RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 PITPNM1O00562 1244 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 FAM107AO95990 144 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 PDK1Q15118 436 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 ANKRD20A2Q5SQ80 823 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 ANKRD20A1Q5TYW2 823 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 SDHAF4Q5VUM1 108 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms