RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 RFC1P35251 1148 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 EIF2DP41214 584 aaKnown RBP20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 PTPN9P43378 593 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 NME3Q13232 169 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 MAMLD1Q13495 774 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 ZNF687Q8N1G0 1237 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 PJA1Q8NG27 643 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 BTN2A3PQ96KV6 586 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 CFAP57Q96MR6 1250 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 TBCBQ99426 244 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 CHP1Q99653 195 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 DEF6Q9H4E7 631 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 CALCOCO1Q9P1Z2 691 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 SLC12A6Q9UHW9 1150 aa20.86■□□□□ 0.93
CSNK1E-207ENST00000430335 STK25O00506 426 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 TFE3P19532 575 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 SDC4P31431 198 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CXCR3P49682 368 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 DEUP1Q05D60 604 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CCDC14Q49A88 953 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 TMEM196Q5HYL7 178 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 BRMS1LQ5PSV4 323 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CCDC122Q5T0U0 273 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 ASTLQ6HA08 431 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 TPGS1Q6ZTW0 290 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 SND1Q7KZF4 910 aaKnown RBP eCLIP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 DNAAF5Q86Y56 855 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 ETFBKMTQ8IXQ9 262 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 ATP6V0D2Q8N8Y2 350 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CD101Q93033 1021 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CCDC42Q96M95 316 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 DDX50Q9BQ39 737 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 FOXQ1Q9C009 403 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 NHEJ1Q9H9Q4 299 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 PIGVQ9NUD9 493 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 IMPACTQ9P2X3 320 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 CNOT8Q9UFF9 292 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 PAXBP1Q9Y5B6 917 aa20.85■□□□□ 0.93
CSNK1E-207ENST00000430335 COL4A3Q01955 1670 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 SYNJ2BP-COX16A0A087WUM0 186 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 ANKRD62A6NC57 917 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 FAM170BA6NMN3 283 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 PENKP01210 267 aaPredicted RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 ABCB4P21439 1286 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 GPD1P21695 349 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 RDXP35241 583 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 OPRD1P41143 372 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 VCPP55072 806 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 UBXN2BQ14CS0 331 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 PON2Q15165 354 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 ANO4Q32M45 955 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 FAM133BQ5BKY9 247 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 DCUN1D2Q6PH85 259 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 STRADAQ7RTN6 431 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 SUGP1Q8IWZ8 645 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 CENPIQ92674 756 aaPredicted RBP20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 RNF34Q969K3 372 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 ZNF653Q96CK0 615 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 MCEEQ96PE7 176 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 PANX2Q96RD6 677 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 P2RY13Q9BPV8 354 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 LRFN3Q9BTN0 628 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 BBS2Q9BXC9 721 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 COX16Q9P0S2 106 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 SIT1Q9Y3P8 196 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 SCINQ9Y6U3 715 aa20.84■□□□□ 0.93
CSNK1E-207ENST00000430335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 NEDD8-MDP1E9PL57 170 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 NCAM2O15394 837 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 AKR1B10O60218 316 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 CACNG3O60359 315 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 MOCS2O96007 188 aaPredicted RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 CYBBP04839 570 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 TYRP14679 529 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 GALK1P51570 392 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 ZNF143P52747 638 aaPredicted RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 RPL7AP62424 266 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 GFPT1Q06210 699 aaPredicted RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 GRSF1Q12849 480 aaKnown RBP eCLIP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 FZD5Q13467 585 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 FYB2Q5VWT5 728 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 NADSYN1Q6IA69 706 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 CCDC105Q8IYK2 499 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 CLDN23Q96B33 292 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 XPO6Q96QU8 1125 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 WDCPQ9H6R7 721 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 MRPL47Q9HD33 250 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 ARHGEF38Q9NXL2 777 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 NDRG2Q9UN36 371 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 MTF2Q9Y483 593 aaPredicted RBP20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 ZDBF2Q9HCK1 2354 aa20.83■□□□□ 0.93
CSNK1E-207ENST00000430335 ATMINO43313 823 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 CHRNB1P11230 501 aa20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 DRD1P21728 446 aa20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 FECHP22830 423 aa20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 MAGEA9P43362 315 aa20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 ATP11AP98196 1134 aa20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 C15orf59Q2T9L4 293 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-207ENST00000430335 MPPE1Q53F39 396 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms