RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CCDC34Q96HJ3 373 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 SPACA7Q96KW9 195 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 LRRC4Q9HBW1 653 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PILRBQ9UKJ0 227 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 DSPP15924 2871 aaKnown RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 BECN2A8MW95 431 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 FOXD2O60548 495 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 HLA-EP13747 358 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 ENGP17813 658 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 COG7P83436 770 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 GCNT1Q02742 428 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 LYSMD4Q5XG99 296 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 RFWD3Q6PCD5 774 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 FOXR2Q6PJQ5 311 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 KIAA1324Q6UXG2 1013 aaKnown RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 LPCAT2Q7L5N7 544 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 SIX6OS1Q8N1H7 587 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 SCML4Q8N228 414 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 ARHGAP18Q8N392 663 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 HSPA12BQ96MM6 686 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 CNGB3Q9NQW8 809 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 THAP10Q9P2Z0 257 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 EVLQ9UI08 416 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 XPO7Q9UIA9 1087 aaKnown RBP12.3□□□□□ -0.44
HDAC4-202ENST00000430200 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 CNTN6Q9UQ52 1028 aa12.3□□□□□ -0.44
HDAC4-202ENST00000430200 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 LTFP02788 710 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 PNMA6AP0CW24 399 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CD70P32970 193 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 MAPK8P45983 427 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 RPL34P49207 117 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 YWHAEP62258 255 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 STIM1Q13586 685 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CNGA2Q16280 664 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CAMK4Q16566 473 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 PTPRNQ16849 979 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 TADA2BQ86TJ2 420 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 TAC4Q86UU9 113 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 ADIPOR2Q86V24 386 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 SYT12Q8IV01 421 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 FCRL2Q96LA5 508 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CRACR2AQ9BSW2 395 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 SRRTQ9BXP5 876 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 MIS12Q9H081 205 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 MTG2Q9H4K7 406 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 CAPN10Q9HC96 672 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 USP36Q9P275 1121 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 WASF3Q9UPY6 502 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
HDAC4-202ENST00000430200 LAMA5O15230 3695 aa12.29□□□□□ -0.44
HDAC4-202ENST00000430200 P4HA2O15460 535 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 PAPSS1O43252 624 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 MAP3K13O43283 966 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 KRT37O76014 449 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 NCAM1P13591 858 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SLC9A1P19634 815 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SPINK2P20155 84 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 CHKAP35790 457 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 GPD2P43304 727 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 DPY19L2P1Q6NXN4 242 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SLC23A3Q6PIS1 610 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 TRIM65Q6PJ69 517 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 KIAA0907Q7Z7F0 614 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 EHBP1Q8NDI1 1231 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 DDI1Q8WTU0 396 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 MYO19Q96H55 970 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 CIPCQ9C0C6 399 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 NUCKS1Q9H1E3 243 aaKnown RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 SIX2Q9NPC8 291 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 TMEM9BQ9NQ34 198 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 ABCC13Q9NSE7 274 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 OLA1Q9NTK5 396 aaKnown RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 ELOVL2Q9NXB9 296 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
HDAC4-202ENST00000430200 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 ZNF510Q9Y2H8 683 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 KNL1Q8NG31 2342 aa12.28□□□□□ -0.44
HDAC4-202ENST00000430200 CHD5Q8TDI0 1954 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms