RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MYCLP12524 364 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 NPPBP16860 134 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 MST1P26927 711 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 GKP32189 559 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 PGDP52209 483 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 COPAP53621 1224 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 TIRAPP58753 221 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 E2F1Q01094 437 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 LY6KQ17RY6 165 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 SLC45A4Q5BKX6 768 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 FCRLBQ6BAA4 426 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 MZT2BQ6NZ67 158 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 RRAGAQ7L523 313 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 KRT28Q7Z3Y7 464 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 C1QL2Q7Z5L3 287 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 SFTPA1Q8IWL2 248 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 C1orf131Q8NDD1 294 aaKnown RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 HASPINQ8TF76 798 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 ERP27Q96DN0 273 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 DAZAP1Q96EP5 407 aaKnown RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 MAELQ96JY0 434 aaKnown RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 PYM1Q9BRP8 204 aaKnown RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 CHCHD6Q9BRQ6 235 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 C1QTNF7Q9BXJ2 289 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 PABPC3Q9H361 631 aaKnown RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 EPS8L2Q9H6S3 715 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 TMEM8AQ9HCN3 771 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 PRDM8Q9NQV8 689 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 SNX15Q9NRS6 342 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 RASSF1Q9NS23 344 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 DNAJB11Q9UBS4 358 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 FBXO2Q9UK22 296 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 ADAM21Q9UKJ8 722 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 AMFRQ9UKV5 643 aa3.37□□□□□ -1.87
HMGB1P9-201ENST00000429856 POLR2AP24928 1970 aaKnown RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 LRRC3CA6NJW4 275 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 H7C1Q1 480 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 EXOC5O00471 708 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ZNF213O14771 459 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 HOXC11O43248 304 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 DNPH1O43598 174 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 TMPRSS11DO60235 418 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 PMPCBO75439 489 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ACTL6BO94805 426 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ARP10275 920 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 IDEP14735 1019 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CST5P28325 142 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ATICP31939 592 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 GATMP50440 423 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 HOXA4Q00056 320 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SLC10A2Q12908 348 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CLCA4Q14CN2 919 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 DLGAP5Q15398 846 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 MAPKAPK3Q16644 382 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CYP1B1Q16678 543 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ST3GAL2Q16842 350 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 BTBD16Q32M84 506 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SLC9C2Q5TAH2 1124 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CCDC30Q5VVM6 783 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 FAAH2Q6GMR7 532 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 TRIM72Q6ZMU5 477 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 PTCHD4Q6ZW05 846 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 KRT73Q86Y46 540 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CCDC89Q8N998 374 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 CCDC150Q8NCX0 1101 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 AFG1LQ8WV93 481 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 RUBCNQ92622 972 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 ZBTB10Q96DT7 871 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SNX27Q96L92 541 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 FAM227BQ96M60 508 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 COG8Q96MW5 612 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 HIST1H2AAQ96QV6 131 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SNX18Q96RF0 628 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 PRR25Q96S07 402 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 SERINC2Q96SA4 455 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 THAP7Q9BT49 309 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 DDX23Q9BUQ8 820 aaKnown RBP3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 FSCN3Q9NQT6 498 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 TMEM160Q9NX00 188 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 TFCP2L1Q9NZI6 479 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 STEAP1Q9UHE8 339 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 HPSEQ9Y251 543 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 DTNAQ9Y4J8 743 aa3.36□□□□□ -1.87
HMGB1P9-201ENST00000429856 LINC01548A6NM66 108 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 A8MVJ9 347 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 H0Y3Z8 333 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 AP4M1O00189 453 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 CES2O00748 559 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 VNN1O95497 513 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 ITGA2BP08514 1039 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 HGFP14210 728 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 RXRAP19793 462 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 RBL1P28749 1068 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 ELF1P32519 619 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 CYP4F2P78329 520 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 FHL3Q13643 280 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 MANEALQ5VSG8 457 aa3.35□□□□□ -1.87
HMGB1P9-201ENST00000429856 KIAA1614Q5VZ46 1190 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms