RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 CHKAP35790 457 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 CXCR3P49682 368 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 STARD6P59095 220 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 PPP2R5DQ14738 602 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 CDO1Q16878 200 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 GAB4Q2WGN9 574 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 SH3PXD2AQ5TCZ1 1133 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 TPGS1Q6ZTW0 290 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 SND1Q7KZF4 910 aaKnown RBP eCLIP23.18■■□□□ 1.3
PTPN18-205ENST00000428843 RALGPS2Q86X27 583 aaPredicted RBP23.18■■□□□ 1.3
PTPN18-205ENST00000428843 CPXM2Q8N436 756 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 ATP6V0D2Q8N8Y2 350 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 ARHGEF26Q96DR7 871 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 CHFRQ96EP1 664 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 SHDQ96IW2 340 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 PACSIN1Q9BY11 444 aa23.18■■□□□ 1.3
PTPN18-205ENST00000428843 MRPL47Q9HD33 250 aaKnown RBP23.18■■□□□ 1.3
PTPN18-205ENST00000428843 XPO7Q9UIA9 1087 aaKnown RBP23.18■■□□□ 1.3
PTPN18-205ENST00000428843 GOLGA6L7A0A1B0GV03 622 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 TMEM191CA6NGB0 347 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 ENDOD1O94919 500 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 CYP1A2P05177 515 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 H2AFZP0C0S5 128 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 CD72P21854 359 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 MRE11P49959 708 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 ZNF143P52747 638 aaPredicted RBP23.17■■□□□ 1.3
PTPN18-205ENST00000428843 OGDHQ02218 1023 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 RAB6CQ53S08 254 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 ADGRF1Q5T601 910 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 NADSYN1Q6IA69 706 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 H2AFVQ71UI9 128 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 STRADAQ7RTN6 431 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 TMTC1Q8IUR5 882 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 CCDC170Q8IYT3 715 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 CENPIQ92674 756 aaPredicted RBP23.17■■□□□ 1.3
PTPN18-205ENST00000428843 MSANTD3Q96H12 275 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 BTN2A3PQ96KV6 586 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 TRIM7Q9C029 511 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 RAB6CQ9H0N0 254 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 WDCPQ9H6R7 721 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 TMEM51Q9NW97 253 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 SLC12A6Q9UHW9 1150 aa23.17■■□□□ 1.3
PTPN18-205ENST00000428843 MIA3Q5JRA6 1907 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 SOWAHDA6NJG2 315 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 TRDMT1O14717 391 aaKnown RBP23.16■■□□□ 1.3
PTPN18-205ENST00000428843 HOXC11O43248 304 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-205ENST00000428843 CCP110O43303 1012 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 PDGFBP01127 241 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-205ENST00000428843 GAD2Q05329 585 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 ANO4Q32M45 955 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 FAM133BQ5BKY9 247 aaKnown RBP23.16■■□□□ 1.3
PTPN18-205ENST00000428843 BRMS1LQ5PSV4 323 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 TXNDC11Q6PKC3 985 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 FAM172AQ8WUF8 416 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 FAM3CQ92520 227 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 BAG1Q99933 345 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-205ENST00000428843 CNPY3Q9BT09 278 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 TBC1D17Q9HA65 648 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 ARHGEF38Q9NXL2 777 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 MARK1Q9P0L2 795 aa23.16■■□□□ 1.3
PTPN18-205ENST00000428843 NEDD8-MDP1E9PL57 170 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 GFRA2O00451 464 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 MAN2B1O00754 1011 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 TSPAN3O60637 253 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 SLC6A4P31645 630 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 CYLC1P35663 651 aaPredicted RBP23.15■■□□□ 1.3
PTPN18-205ENST00000428843 GSDMDP57764 484 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 AMPD2Q01433 879 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 NAIF1Q69YI7 327 aaPredicted RBP23.15■■□□□ 1.3
PTPN18-205ENST00000428843 RFWD3Q6PCD5 774 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 ZNF852Q6ZMS4 543 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 FAM131BQ86XD5 332 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 TMEM139Q8IV31 216 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 CTNNBL1Q8WYA6 563 aaPredicted RBP23.15■■□□□ 1.3
PTPN18-205ENST00000428843 BHMTQ93088 406 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 P2RY11Q96G91 374 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 DDX50Q9BQ39 737 aaKnown RBP23.15■■□□□ 1.3
PTPN18-205ENST00000428843 NUP85Q9BW27 656 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 BBS2Q9BXC9 721 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 TKTL2Q9H0I9 626 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 MFSD1Q9H3U5 465 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 ANLNQ9NQW6 1124 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 PAXBP1Q9Y5B6 917 aa23.15■■□□□ 1.3
PTPN18-205ENST00000428843 KANSL1LA0AUZ9 987 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 FAM86C2PA6NEL3 165 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 STK25O00506 426 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 LCA5LO95447 670 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 TMEM253P0C7T8 217 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 PSMA2P25787 234 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 OPRD1P41143 372 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 HDAC4P56524 1084 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 ZNF252P-AS1Q0IIN9 211 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 C1orf228Q6PIY5 440 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 C12orf40Q86WS4 652 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 FLCNQ8NFG4 579 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 PLK2Q9NYY3 685 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 TRIOO75962 3097 aa23.14■■□□□ 1.29
PTPN18-205ENST00000428843 I6L893 689 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-205ENST00000428843 PENKP01210 267 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms