RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 GMIPQ9P107 970 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 WHRNQ9P202 907 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
NR1I3-209ENST00000428574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 C2CD2LO14523 706 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 TLR5O60602 858 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 SEC24AO95486 1093 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CXCL14O95715 111 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 GLUD1P00367 558 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CD48P09326 243 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CNPP09543 421 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 RARGP13631 454 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 KRT10P13645 584 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 SYN1P17600 705 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ITIH2P19823 946 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ATP5C1P36542 298 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 GPR15P49685 360 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ERVK-21P61565 698 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 USP46P62068 366 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 COG7P83436 770 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CALCOCO2Q13137 446 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 RAB30Q15771 203 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PPP6R3Q5H9R7 873 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 KAZNQ674X7 775 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 MREGQ8N565 214 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 SPPL3Q8TCT6 385 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 DPF3Q92784 378 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CASP10Q92851 521 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 SNF8Q96H20 258 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 KLHL5Q96PQ7 755 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 TCF25Q9BQ70 676 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 R3HDM2Q9Y2K5 976 aaKnown RBP9.39□□□□□ -0.91
NR1I3-209ENST00000428574 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
NR1I3-209ENST00000428574 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 H3BNC9 293 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 DCLK1O15075 740 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 TGM5O43548 720 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 OLFM2O95897 454 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 RBP3P10745 1247 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MX2P20592 715 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 KLRC2P26717 231 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 CDC25CP30307 473 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MAGEA10P43363 369 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 CLCN6P51797 869 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 EPHA5P54756 1037 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MLLT6P55198 1093 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 TBX4P57082 545 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 TPI1P60174 286 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 EIF3EP60228 445 aaKnown RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 CBLBQ13191 982 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 PDK1Q15118 436 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 TAF12Q16514 161 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 CA9Q16790 459 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 RAB6CQ53S08 254 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 C10orf120Q5SQS8 335 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 KIAA1958Q8N8K9 716 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms