RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PGFP49763 221 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 APLP1P51693 650 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 GEMIN4P57678 1058 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 FAM189BP81408 668 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 DSC1Q08554 894 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 PM20D1Q6GTS8 502 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ARHGEF18Q6ZSZ5 1173 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 CAND1Q86VP6 1230 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 COLGALT2Q8IYK4 626 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 SLAIN1Q8ND83 568 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 GDAP1Q8TB36 358 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 CHMP6Q96FZ7 201 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 OLFM3Q96PB7 478 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 QKIQ96PU8 341 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 FAM193BQ96PV7 902 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TKTL2Q9H0I9 626 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 PRDM12Q9H4Q4 367 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ABI2Q9NYB9 513 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 RCOR3Q9P2K3 495 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TEX264Q9Y6I9 313 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 A0A1W2PPM1 405 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 KCNK1O00180 336 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 NBNO60934 754 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 FKTNO75072 461 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 DGKIO75912 1065 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 VIMP08670 466 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 SELPP16109 830 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ERCC2P18074 760 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 GATMP50440 423 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 MAPRE1Q15691 268 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ARL13BQ3SXY8 428 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ANKRD20A2Q5SQ80 823 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ANKRD20A1Q5TYW2 823 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ANKRD20A3Q5VUR7 823 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 DENND5BQ6ZUT9 1274 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 C4orf33Q8N1A6 199 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 CFAP36Q96G28 342 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 P2RY11Q96G91 374 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 B3GALT6Q96L58 329 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 PGLYRP2Q96PD5 576 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 ZNF317Q96PQ6 595 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TRIM56Q9BRZ2 755 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 OR12D3Q9UGF7 316 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TRIM17Q9Y577 477 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 MRPL42Q9Y6G3 142 aaKnown RBP10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TCRBV9S1A1TA0A576 114 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 C5orf60A6NFR6 353 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SRRM3A6NNA2 597 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 GNRH1P01148 92 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TYMPP19971 482 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 MAP2K2P36507 400 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SLC5A3P53794 718 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TPI1P60174 286 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 DPYSQ14117 519 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 GPNMBQ14956 572 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 DDR2Q16832 855 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PPP1R21Q6ZMI0 780 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TAC4Q86UU9 113 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TRABD2AQ86V40 505 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 LRRC34Q8IZ02 419 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 ABI1Q8IZP0 508 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 RIBC1Q8N443 379 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PAFAH2Q99487 392 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PHACTR1Q9C0D0 580 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SIK2Q9H0K1 926 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 ACSS3Q9H6R3 686 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PIH1D1Q9NWS0 290 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PSMC3IPQ9P2W1 217 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 MAD1L1Q9Y6D9 718 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 CASP8AP2Q9UKL3 1982 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 ENPP3O14638 875 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 INPPL1O15357 1258 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 F9P00740 461 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SRGAP2BP0DMP2 458 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 DRD4P21917 467 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 EPHB2P29323 1055 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 MSH2P43246 934 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 C4orf50Q6ZRC1 276 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TDRPQ86YL5 185 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 DQX1Q8TE96 717 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 NTAN1Q96AB6 310 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 PGAP3Q96FM1 320 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 TRABDQ9H4I3 376 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SFMBT1Q9UHJ3 866 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 SLC24A2Q9UI40 661 aa10.74□□□□□ -0.69
HDAC9-210ENST00000428307 RRP15Q9Y3B9 282 aaKnown RBP10.74□□□□□ -0.69
HDAC9-210ENST00000428307 A0A0A0MRY4 1105 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 ARHGEF37A1IGU5 675 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 NT5C1B-RDH14C9J2C7 533 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 RNF103O00237 685 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms