RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 TSPAN3O60637 253 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 LATS1O95835 1130 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 FUT11Q495W5 492 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 ADGRF1Q5T601 910 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 UCMAQ8WVF2 138 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 CNTNAP3BQ96NU0 1288 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 CNTNAP3Q9BZ76 1288 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 TMEM9BQ9NQ34 198 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 RWDD2AQ9UIY3 292 aa28.4■■■□□ 2.14
LMO1-202ENST00000428101 ATXN2Q99700 1313 aaKnown RBP28.4■■■□□ 2.14
LMO1-202ENST00000428101 KCNK5O95279 499 aa28.39■■■□□ 2.14
LMO1-202ENST00000428101 FGFR1OPO95684 399 aaKnown RBP28.39■■■□□ 2.14
LMO1-202ENST00000428101 IGLV3-27P01718 113 aa28.39■■■□□ 2.14
LMO1-202ENST00000428101 LTFP02788 710 aa28.39■■■□□ 2.14
LMO1-202ENST00000428101 GPD2P43304 727 aa28.39■■■□□ 2.14
LMO1-202ENST00000428101 RPL34P49207 117 aaKnown RBP28.39■■■□□ 2.14
LMO1-202ENST00000428101 N4BP2L1Q5TBK1 243 aaPredicted RBP28.39■■■□□ 2.14
LMO1-202ENST00000428101 SORCS1Q8WY21 1168 aa28.39■■■□□ 2.14
LMO1-202ENST00000428101 UBE2TQ9NPD8 197 aaPredicted RBP28.39■■■□□ 2.14
LMO1-202ENST00000428101 FBXO21O94952 628 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 FYNP06241 537 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 ZNF33AQ06730 810 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 ZNF234Q14588 700 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 EIF4HQ15056 248 aaKnown RBP28.38■■■□□ 2.13
LMO1-202ENST00000428101 SLC41A1Q8IVJ1 513 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 TMA16Q96EY4 203 aaKnown RBP28.38■■■□□ 2.13
LMO1-202ENST00000428101 MKRN2Q9H000 416 aaKnown RBP28.38■■■□□ 2.13
LMO1-202ENST00000428101 MIS12Q9H081 205 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 ACACBO00763 2458 aa28.38■■■□□ 2.13
LMO1-202ENST00000428101 ADAMTS9Q9P2N4 1935 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 KRT5P13647 590 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 HLA-FP30511 346 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 DPP6P42658 865 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 SGSHP51688 502 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 ZNF445P59923 1031 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 STARD3Q14849 445 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 DAB2IPQ5VWQ8 1189 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 SLC23A3Q6PIS1 610 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 KIAA1324Q6UXG2 1013 aaKnown RBP28.37■■■□□ 2.13
LMO1-202ENST00000428101 SCUBE3Q8IX30 993 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 CRACR2AQ9BSW2 395 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 NUSAP1Q9BXS6 441 aaKnown RBP28.37■■■□□ 2.13
LMO1-202ENST00000428101 CIPCQ9C0C6 399 aa28.37■■■□□ 2.13
LMO1-202ENST00000428101 TIMM44O43615 452 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 PRKCHP24723 683 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 HOXD12P35452 270 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 LMAN2Q12907 356 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 DENND1BQ6P3S1 775 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 METTL3Q86U44 580 aaKnown RBP28.36■■■□□ 2.13
LMO1-202ENST00000428101 PRDM16Q9HAZ2 1276 aa28.36■■■□□ 2.13
LMO1-202ENST00000428101 GOLGA6L7A0A1B0GV03 622 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 NCAM1P13591 858 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 RING1Q06587 406 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 FAM133BQ5BKY9 247 aaKnown RBP28.35■■■□□ 2.13
LMO1-202ENST00000428101 RFWD3Q6PCD5 774 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 GJB7Q6PEY0 223 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 IRF2BP1Q8IU81 584 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 UNC45BQ8IWX7 931 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 GOLGA1Q92805 767 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 ZNF419Q96HQ0 510 aaPredicted RBP28.35■■■□□ 2.13
LMO1-202ENST00000428101 ACP6Q9NPH0 428 aa28.35■■■□□ 2.13
LMO1-202ENST00000428101 USP36Q9P275 1121 aaKnown RBP28.35■■■□□ 2.13
LMO1-202ENST00000428101 ENGP17813 658 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 PMLP29590 882 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 SLC6A4P31645 630 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 TBX4P57082 545 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 E2F5Q15329 346 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 DUOXA1Q1HG43 343 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 PIK3R6Q5UE93 754 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 NUGGCQ68CJ6 796 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 PSAPL1Q6NUJ1 521 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 TRIM65Q6PJ69 517 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 KIAA0907Q7Z7F0 614 aaPredicted RBP28.34■■■□□ 2.13
LMO1-202ENST00000428101 CREBRFQ8IUR6 639 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.34■■■□□ 2.13
LMO1-202ENST00000428101 ZNF606Q8WXB4 792 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 FSCN3Q9NQT6 498 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 ST7Q9NRC1 585 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 CYTH4Q9UIA0 394 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 NAALADL1Q9UQQ1 740 aa28.34■■■□□ 2.13
LMO1-202ENST00000428101 GIPC1O14908 333 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 ACSL4O60488 711 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 SYNCRIPO60506 623 aaKnown RBP28.33■■■□□ 2.13
LMO1-202ENST00000428101 SLC9A1P19634 815 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 COPAP53621 1224 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 APBA1Q02410 837 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 MEA1Q16626 185 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 ENOSF1Q7L5Y1 443 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 ADIPOR2Q86V24 386 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 TMPRSS6Q8IU80 811 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 CEP76Q8TAP6 659 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 WFDC5Q8TCV5 224 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 DQX1Q8TE96 717 aaKnown RBP28.33■■■□□ 2.13
LMO1-202ENST00000428101 STK32AQ8WU08 396 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 AZIN2Q96A70 460 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 FCRL2Q96LA5 508 aaPredicted RBP28.33■■■□□ 2.13
LMO1-202ENST00000428101 HSPA12BQ96MM6 686 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 SLC4A5Q9BY07 1137 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 ITM2CQ9NQX7 267 aa28.33■■■□□ 2.13
LMO1-202ENST00000428101 ABCB8Q9NUT2 735 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms