RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 HCFC2Q9Y5Z7 792 aa12.51□□□□□ -0.41
RFC4-206ENST00000427785 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
RFC4-206ENST00000427785 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
RFC4-206ENST00000427785 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 TNRC18O15417 2968 aaPredicted RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 APOL1O14791 398 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 RAD51CO43502 376 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 PAGE1O75459 146 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 TJP3O95049 919 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 IGLV3-27P01718 113 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 F11P03951 625 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 IRF1P10914 325 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 GJA1P17302 382 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 CCR1P32246 355 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 ARL4AP40617 200 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 TUBP50607 506 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 AIF1P55008 147 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 TPI1P60174 286 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 SEMA3BQ13214 749 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 NNTQ13423 1086 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 PPP2R5DQ14738 602 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 DUSP6Q16828 381 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 ANKRD20A8PQ5CZ79 823 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 SNX30Q5VWJ9 437 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 NPNTQ6UXI9 565 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 GAREM2Q75VX8 874 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 PSTKQ8IV42 348 aaKnown RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 PQLC3Q8N755 202 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 PCDH19Q8TAB3 1148 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 MAGOHBQ96A72 148 aaKnown RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 SLC39A13Q96H72 371 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 RNF157Q96PX1 679 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 GCNAQ96QF7 691 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 CDK5RAP1Q96SZ6 601 aaKnown RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 LRRC3Q9BY71 257 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 TLE6Q9H808 572 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 ASAH2Q9NR71 780 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
RFC4-206ENST00000427785 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
RFC4-206ENST00000427785 A0A1W2PRU2 124 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 MFSD11O43934 449 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 MAP3K6O95382 1288 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
RFC4-206ENST00000427785 AMPD1P23109 780 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 IL4RP24394 825 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 ATP5C1P36542 298 aaKnown RBP12.49□□□□□ -0.41
RFC4-206ENST00000427785 KCNJ1P48048 391 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 KCNQ1P51787 676 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
RFC4-206ENST00000427785 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
RFC4-206ENST00000427785 DPYSQ14117 519 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 PIK3R6Q5UE93 754 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 RFX8Q6ZV50 586 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 VSIG1Q86XK7 387 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 PLD5Q8N7P1 536 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 VN1R2Q8NFZ6 395 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 CCDC114Q96M63 670 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 SLC22A12Q96S37 553 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 EPAS1Q99814 870 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 TRIM51Q9BSJ1 452 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
RFC4-206ENST00000427785 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 SLITRK6Q9H5Y7 841 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 NEU3Q9UQ49 428 aa12.49□□□□□ -0.41
RFC4-206ENST00000427785 KIF26AQ9ULI4 1882 aaPredicted RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 KCNU1A8MYU2 1149 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 TTI1O43156 1089 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 XYLBO75191 536 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 LRIG2O94898 1065 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 CDC25CP30307 473 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 HOXA9P31269 272 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 CHRNA3P32297 505 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 COILP38432 576 aaPredicted RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 CCR2P41597 374 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 PPP3CCP48454 512 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 FNTAP49354 379 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 NTHL1P78549 312 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 SLC7A5Q01650 507 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 TFDP2Q14188 446 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 NCBP2-AS2Q69YL0 99 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 SLC9A4Q6AI14 798 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 CCDC137Q6PK04 289 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms