RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 TMEM25Q86YD3 366 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 BHMTQ93088 406 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 SLC2A13Q96QE2 648 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 NUCKS1Q9H1E3 243 aaKnown RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 ARHGAP20Q9P2F6 1191 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 HSF2BPO75031 334 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 MFAP3LO75121 409 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 APODP05090 189 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 FLT3P36888 993 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 SNX16P57768 344 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 TRIM14Q14142 442 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 HEATR6Q6AI08 1181 aaKnown RBP16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 ACAD10Q6JQN1 1059 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 TOGARAM2Q6ZUX3 1019 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 DENND1CQ8IV53 801 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 ATRIPQ8WXE1 791 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 P2RY11Q96G91 374 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 PNKPQ96T60 521 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 DNAJC7Q99615 494 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 BBS2Q9BXC9 721 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 PRMT8Q9NR22 394 aaPredicted RBP16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 ARHGEF4Q9NR80 690 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 ASNSD1Q9NWL6 643 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 C2orf42Q9NWW7 574 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 ADAM22Q9P0K1 906 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 TMEM59LQ9UK28 342 aa16.33■□□□□ 0.2
CLK3P2-201ENST00000427566 NRDCO43847 1150 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 TRUB2O95900 331 aaKnown RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 SERPING1P05155 500 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 GLI1P08151 1106 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 TRIP4Q15650 581 aaPredicted RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 ZNF528Q3MIS6 628 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 FBXO43Q4G163 708 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 C2orf27AQ580R0 203 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 BEND5Q7L4P6 421 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 ZDHHC17Q8IUH5 632 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 EMC1Q8N766 993 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 OR8K1Q8NGG5 319 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 EZH1Q92800 747 aaPredicted RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 METTL5Q9NRN9 209 aaKnown RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 PLK2Q9NYY3 685 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 AGO1Q9UL18 857 aaKnown RBP16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 SLC8A2Q9UPR5 921 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 ZNF510Q9Y2H8 683 aa16.32■□□□□ 0.2
CLK3P2-201ENST00000427566 SYNJ2BP-COX16A0A087WUM0 186 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 GFRA3O60609 400 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 ATG13O75143 517 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 DAB1O75553 588 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 KAT7O95251 611 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 IGLV3-25P01717 112 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 IGLV3-27P01718 113 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 TYRP14679 529 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 EML5Q05BV3 1969 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 EIF4EBP2Q13542 120 aaPredicted RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 MCOLN2Q8IZK6 566 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 MYO18AQ92614 2054 aaKnown RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 PLD4Q96BZ4 506 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 FCRL2Q96LA5 508 aaPredicted RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 XPO6Q96QU8 1125 aaKnown RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 DNAJC17Q9NVM6 304 aaKnown RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 POLR3BQ9NW08 1133 aaPredicted RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 ZSCAN32Q9NX65 697 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 COX16Q9P0S2 106 aa16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 HBS1LQ9Y450 684 aaKnown RBP16.31■□□□□ 0.2
CLK3P2-201ENST00000427566 A0A087X0T9 212 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 TCRBV5S1A1TA0A578 114 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 ANTXRLA6NF34 631 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 CHURC1-FNTBB4DL54 471 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 IRAK2O43187 625 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 HOXC11O43248 304 aaPredicted RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 ATMINO43313 823 aaPredicted RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 TULP3O75386 442 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 FAM228BP0C875 321 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 RRM1P23921 792 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 HOXC13P31276 330 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 SCNN1AP37088 669 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 EIF4A3P38919 411 aaKnown RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 MATKP42679 507 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 FNTBP49356 437 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 HARS2P49590 506 aaKnown RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 NRLP54845 237 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 TBX4P57082 545 aa16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
CLK3P2-201ENST00000427566 RAB6CQ53S08 254 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms