RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CCDC6Q16204 474 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 ADGRF1Q5T601 910 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 SMYD5Q6GMV2 418 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 RFWD3Q6PCD5 774 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 WFDC5Q8TCV5 224 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 DDI1Q8WTU0 396 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 PRICKLE1Q96MT3 831 aaPredicted RBP19.95■□□□□ 0.78
COL9A2-204ENST00000427563 GABRG3Q99928 467 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 VPS16Q9H269 839 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 LHX5Q9H2C1 402 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 SEMA4GQ9NTN9 838 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 CACNA2D2Q9NY47 1150 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 XPO7Q9UIA9 1087 aaKnown RBP19.95■□□□□ 0.78
COL9A2-204ENST00000427563 RAD54BQ9Y620 910 aa19.95■□□□□ 0.78
COL9A2-204ENST00000427563 CEP192Q8TEP8 1941 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 ERBB2P04626 1255 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 HOXB2P14652 356 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 UCHL3P15374 230 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 ID4P47928 161 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 PTK2Q05397 1052 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 RAPGEF1Q13905 1077 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 MAP7D1Q3KQU3 841 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 PTPN20Q4JDL3 420 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 MPPE1Q53F39 396 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 CCDC183Q5T5S1 534 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 HMGB4Q8WW32 186 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 SORCS1Q8WY21 1168 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 DDX1Q92499 740 aaKnown RBP19.94■□□□□ 0.78
COL9A2-204ENST00000427563 ARRDC1-AS1Q9H2J1 176 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 POLMQ9NP87 494 aaPredicted RBP19.94■□□□□ 0.78
COL9A2-204ENST00000427563 MBD1Q9UIS9 605 aaPredicted RBP19.94■□□□□ 0.78
COL9A2-204ENST00000427563 USP18Q9UMW8 372 aa19.94■□□□□ 0.78
COL9A2-204ENST00000427563 LAMA1P25391 3075 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 PES1O00541 588 aaKnown RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 ACSL4O60488 711 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 LRP3O75074 770 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 CYBBP04839 570 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 HLA-FP30511 346 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 P2RY2P41231 377 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 NNTQ13423 1086 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 ENPP2Q13822 863 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 PIK3R6Q5UE93 754 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 OLFML1Q6UWY5 402 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 NUDT18Q6ZVK8 323 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 FAM183BPQ6ZVS7 135 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 APTXQ7Z2E3 356 aaKnown RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 TRMT11Q7Z4G4 463 aaKnown RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 KIAA0907Q7Z7F0 614 aaPredicted RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 CHPFQ8IZ52 775 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 IPO4Q8TEX9 1081 aaKnown RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 GOLGA1Q92805 767 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 LOXL4Q96JB6 756 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 PPP1R13BQ96KQ4 1090 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 SLC2A13Q96QE2 648 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 ADAM33Q9BZ11 813 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 SLC6A17Q9H1V8 727 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 SMOC1Q9H4F8 434 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 POPDC2Q9HBU9 364 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 CD93Q9NPY3 652 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 ANO10Q9NW15 660 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 DLL3Q9NYJ7 618 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 THAP10Q9P2Z0 257 aaPredicted RBP19.93■□□□□ 0.78
COL9A2-204ENST00000427563 TLR6Q9Y2C9 796 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 SIK3Q9Y2K2 1263 aa19.93■□□□□ 0.78
COL9A2-204ENST00000427563 FAM170AA1A519 330 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 IRAK2O43187 625 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 MBD3O95983 291 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 CYP11B1P15538 503 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 ZNF18P17022 549 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 IL12RB1P42701 662 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 YWHAZP63104 245 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 CSRP2Q16527 193 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 STX1AQ16623 288 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 RSPO4Q2I0M5 234 aaPredicted RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 USP39Q53GS9 565 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 PLA2G2CQ5R387 149 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 NUGGCQ68CJ6 796 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 PMS2CLQ68D20 193 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 SASS6Q6UVJ0 657 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 PRR23CQ6ZRP0 262 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 ANKS1BQ7Z6G8 1248 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 GPR161Q8N6U8 529 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 AZIN2Q96A70 460 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 TMA16Q96EY4 203 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 LMLNQ96KR4 655 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 SERPINB11Q96P15 392 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 SLC2A11Q9BYW1 496 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 NUCKS1Q9H1E3 243 aaKnown RBP19.92■□□□□ 0.78
COL9A2-204ENST00000427563 STON1Q9Y6Q2 735 aa19.92■□□□□ 0.78
COL9A2-204ENST00000427563 F8VZ95 297 aa19.91■□□□□ 0.78
COL9A2-204ENST00000427563 GDF9O60383 454 aa19.91■□□□□ 0.78
COL9A2-204ENST00000427563 GRAP2O75791 330 aa19.91■□□□□ 0.78
COL9A2-204ENST00000427563 ALDH1A2O94788 518 aa19.91■□□□□ 0.78
COL9A2-204ENST00000427563 TRUB2O95900 331 aaKnown RBP19.91■□□□□ 0.78
COL9A2-204ENST00000427563 NDUFV2P19404 249 aa19.91■□□□□ 0.78
COL9A2-204ENST00000427563 CDH5P33151 784 aaPredicted RBP19.91■□□□□ 0.78
COL9A2-204ENST00000427563 COPB1P53618 953 aaKnown RBP19.91■□□□□ 0.78
COL9A2-204ENST00000427563 SF3A2Q15428 464 aaKnown RBP19.91■□□□□ 0.78
COL9A2-204ENST00000427563 ZC3H12AQ5D1E8 599 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms