RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 FAM124AQ86V42 546 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 UBA3Q8TBC4 463 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 PRCCQ92733 491 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-213ENST00000427007 PLD4Q96BZ4 506 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 FAXDC2Q96IV6 333 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 SCAND2PQ9GZW5 306 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-213ENST00000427007 LRRC4Q9HBW1 653 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
HDLBP-213ENST00000427007 A0A1B0GTW7 788 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 TRIM49BA6NDI0 452 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 TMEM8BA6NDV4 472 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 SRRM3A6NNA2 597 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 YJEFN3A6XGL0 299 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 E7ENQ6 273 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 PIK3R2O00459 728 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 NPC1O15118 1278 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 MSI1O43347 362 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 HOXD9P28356 352 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 RDXP35241 583 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 HARS2P49590 506 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 ZNF132P52740 706 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 BCAT1P54687 386 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 BST2Q10589 180 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 CUL2Q13617 745 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 EIF4HQ15056 248 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 TRIP4Q15650 581 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 TRIP6Q15654 476 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 MPPE1Q53F39 396 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 NAXDQ8IW45 347 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 FAM217AQ8IXS0 508 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 ZNF366Q8N895 744 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 RBBP8NLQ8NC74 664 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 RNF139Q8WU17 664 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 CYB5D2Q8WUJ1 264 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 ERCC4Q92889 916 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 IL21RQ9HBE5 538 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 OLA1Q9NTK5 396 aaKnown RBP10.67□□□□□ -0.7
HDLBP-213ENST00000427007 HESX1Q9UBX0 185 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
HDLBP-213ENST00000427007 GON4LQ3T8J9 2241 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SPEGQ15772 3267 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 METTL12A8MUP2 240 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 H0Y626 953 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SLC16A3O15427 465 aaKnown RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 TRIM16O95361 564 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 LCP1P13796 627 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 HLA-FP30511 346 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 OXTRP30559 389 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 RGS7P49802 495 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SGSHP51688 502 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 PMS1P54277 932 aaKnown RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SLC14A1Q13336 389 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 FNDC3BQ53EP0 1204 aaKnown RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 ZNF658Q5TYW1 1059 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 BSPRYQ5W0U4 402 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 ANKRD40Q6AI12 368 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SIX6OS1Q8N1H7 587 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 PNPLA1Q8N8W4 532 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 CADM4Q8NFZ8 388 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 DNASE2BQ8WZ79 361 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SNX19Q92543 992 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 TSG101Q99816 390 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 SLC2A11Q9BYW1 496 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 GAREM1Q9H706 876 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 ABCB8Q9NUT2 735 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 RMND1Q9NWS8 449 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 EIF2B4Q9UI10 523 aaKnown RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 COQ4Q9Y3A0 265 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 HBS1LQ9Y450 684 aaKnown RBP10.66□□□□□ -0.7
HDLBP-213ENST00000427007 ATP6V1DQ9Y5K8 247 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 TMEM131Q92545 1883 aa10.66□□□□□ -0.7
HDLBP-213ENST00000427007 O00370 1275 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 BCAT2O15382 392 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 CALCAP01258 141 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 FTH1P19P0C7X4 201 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 VDRP11473 427 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 DAOAP59103 153 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 YWHAEP62258 255 aaKnown RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 FKBP3Q00688 224 aaKnown RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 BNC1Q01954 994 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 HNRNPDQ14103 355 aaKnown RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 E2F5Q15329 346 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 ZNF423Q2M1K9 1284 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 RAB44Q7Z6P3 723 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 UBR7Q8N806 425 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 OR2T3Q8NH03 318 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 WFDC5Q8TCV5 224 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 SETD7Q8WTS6 366 aaKnown RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 SLC35C1Q96A29 364 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 TMA16Q96EY4 203 aaKnown RBP10.65□□□□□ -0.7
HDLBP-213ENST00000427007 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 NUP58Q9BVL2 599 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 ZDHHC5Q9C0B5 715 aa10.65□□□□□ -0.7
HDLBP-213ENST00000427007 LHX5Q9H2C1 402 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms