RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 E7ENQ6 273 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 HYAL3O43820 417 aaPredicted RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 NDUFS2O75306 463 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 NCAM1P13591 858 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 HOXD9P28356 352 aaPredicted RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 TPMTP51580 245 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 COPAP53621 1224 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 BCAT1P54687 386 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 FKBP3Q00688 224 aaKnown RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 BST2Q10589 180 aaKnown RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 LRMPQ12912 555 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 STARD3Q14849 445 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 SGO2Q562F6 1265 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 BSPRYQ5W0U4 402 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 ANKS1BQ7Z6G8 1248 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 RABEPKQ7Z6M1 372 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 TMPRSS6Q8IU80 811 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 FMNL3Q8IVF7 1028 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 KDF1Q8NAX2 398 aaPredicted RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 DDI1Q8WTU0 396 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 KCTD13Q8WZ19 329 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 DNASE2BQ8WZ79 361 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 EDEM1Q92611 657 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 PLD4Q96BZ4 506 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 TOE1Q96GM8 510 aaKnown RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 GSDMAQ96QA5 445 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 SLC32A1Q9H598 525 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 PRDM16Q9HAZ2 1276 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 DNAAF2Q9NVR5 837 aaKnown RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 RMND1Q9NWS8 449 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 STOML2Q9UJZ1 356 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 RALYQ9UKM9 306 aaKnown RBP10.5□□□□□ -0.73
GACAT3-201ENST00000426539 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 MYH10P35580 1976 aa10.5□□□□□ -0.73
GACAT3-201ENST00000426539 CACNA1EQ15878 2313 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 RNF225M0QZC1 329 aaPredicted RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 NPC1O15118 1278 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 MSI1O43347 362 aaKnown RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 TSPAN3O60637 253 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 OPHN1O60890 802 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 CALCAP01258 141 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 IGLV3-19P01714 112 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 CYBBP04839 570 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 VDRP11473 427 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 HLA-EP13747 358 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 CD19P15391 556 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 HLA-FP30511 346 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 SGSHP51688 502 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 ZNF132P52740 706 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 ATXN3P54252 364 aaPredicted RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 SIM1P81133 766 aaPredicted RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 PLEKHG6Q3KR16 790 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 MPPE1Q53F39 396 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 LCLAT1Q6UWP7 414 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 KIAA0907Q7Z7F0 614 aaPredicted RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 RGL4Q8IZJ4 473 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 SCML4Q8N228 414 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 HDDC3Q8N4P3 179 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 FOXJ1Q92949 421 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 KAT5Q92993 513 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 CAMK1GQ96NX5 476 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 TSG101Q99816 390 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 GPR174Q9BXC1 333 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 SLC2A11Q9BYW1 496 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 CIPCQ9C0C6 399 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 LRRC4Q9HBW1 653 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 HESX1Q9UBX0 185 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 ARMCX3Q9UH62 379 aaPredicted RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 KLK13Q9UKR3 277 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 ZMIZ1Q9ULJ6 1067 aa10.49□□□□□ -0.73
GACAT3-201ENST00000426539 HBS1LQ9Y450 684 aaKnown RBP10.49□□□□□ -0.73
GACAT3-201ENST00000426539 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SH3BP5O60239 455 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SYNCRIPO60506 623 aaKnown RBP10.48□□□□□ -0.73
GACAT3-201ENST00000426539 IGLV3-27P01718 113 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 EPHX1P07099 455 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SYPP08247 313 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SETSIPP0DME0 302 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 LCP1P13796 627 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 FMO5P49326 533 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 RGS7P49802 495 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SLC8A3P57103 927 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 DAOAP59103 153 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 BNC1Q01954 994 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 GRIK2Q13002 908 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 PTPRNQ16849 979 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SYCP2LQ5T4T6 812 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 PMF1Q6P1K2 205 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 MSANTD2Q6P1R3 559 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 ADIPOR2Q86V24 386 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 CACUL1Q86Y37 369 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms