RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PANK4Q9NVE7 773 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 INTS7Q9NVH2 962 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 SEL1LQ9UBV2 794 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 RCOR1Q9UKL0 485 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 EXOC7Q9UPT5 735 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 GPR55Q9Y2T6 319 aaPredicted RBP6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 SNX11Q9Y5W9 270 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 C2orf16Q68DN1 1984 aa6.66□□□□□ -1.34
NIF3L1-207ENST00000426253 PIEZO2Q9H5I5 2752 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 A0A087X0B3 334 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 C4orf47A7E2U8 309 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 H7C4K7 107 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 AURKAO14965 403 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 POLR2DO15514 142 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ADAM12O43184 909 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 XPOTO43592 962 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 GCNT3O95395 438 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ADRB2P07550 413 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SNRPB2P08579 225 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CEACAM1P13688 526 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 FSTP19883 344 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CYP3A5P20815 502 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ME1P48163 572 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 FNTBP49356 437 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ACOT2P49753 483 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CLCN7P51798 805 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 GPC5P78333 572 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CYP4F3Q08477 520 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SCAPQ12770 1279 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 PKP1Q13835 747 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ZBTB6Q15916 424 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 PPM1LQ5SGD2 360 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SLC39A4Q6P5W5 647 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SHC4Q6S5L8 630 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CCDC65Q8IXS2 484 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SYCP3Q8IZU3 236 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 IQUBQ8NA54 791 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 TMEM145Q8NBT3 493 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 POMGNT1Q8WZA1 660 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 PTPRN2Q92932 1015 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ZNF707Q96C28 371 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 C1orf159Q96HA4 380 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 FCRL3Q96P31 734 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ACCSQ96QU6 501 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 TSPAN18Q96SJ8 248 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 EDEM2Q9BV94 578 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 WDR6Q9NNW5 1121 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 PCDH12Q9NPG4 1184 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ZDHHC7Q9NXF8 308 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CPSF3Q9UKF6 684 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 AGO2Q9UKV8 859 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 UBQLN1Q9UMX0 589 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 PCDHA7Q9UN72 937 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 CDY1Q9Y6F8 540 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 STYXL1Q9Y6J8 313 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
NIF3L1-207ENST00000426253 ANKRD17O75179 2603 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 TDRD15B5MCY1 1934 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 SHROOM3Q8TF72 1996 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 TISP43B9A030 160 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 SYN3O14994 580 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 FAM189A1O60320 539 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 LDHAP00338 332 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 CEACAM5P06731 702 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 HNRNPA1P09651 372 aaKnown RBP eCLIP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 TDGF1P13385 188 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 VAV1P15498 845 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 LRPAP1P30533 357 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 ELF1P32519 619 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 ARPP19P56211 112 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 POU5F1Q01860 360 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 DPY19L1Q2PZI1 675 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 CTXN3Q4LDR2 81 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 SLC44A4Q53GD3 710 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 L1TD1Q5T7N2 865 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 LIN9Q5TKA1 542 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 SPATA1Q5VX52 437 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 JADE1Q6IE81 842 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 CRELD2Q6UXH1 353 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 RSPO2Q6UXX9 243 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 DSTYKQ6XUX3 929 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 TPRG1Q6ZUI0 275 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 MAMDC2Q7Z304 686 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 GRASPQ7Z6J2 395 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 APPL2Q8NEU8 664 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 BEST2Q8NFU1 509 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 ZNF461Q8TAF7 563 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 DHX58Q96C10 678 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 HVCN1Q96D96 273 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 HSPA12BQ96MM6 686 aa6.64□□□□□ -1.35
NIF3L1-207ENST00000426253 C7orf25Q9BPX7 421 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms