RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PLD4Q96BZ4 506 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 SLC39A13Q96H72 371 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 BTN2A3PQ96KV6 586 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 EPAS1Q99814 870 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 DDX50Q9BQ39 737 aaKnown RBP10.71□□□□□ -0.69
MDC1-205ENST00000425072 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.69
MDC1-205ENST00000425072 CARD6Q9BX69 1037 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 LRRC3Q9BY71 257 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
MDC1-205ENST00000425072 IGFLR1Q9H665 355 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 RETREG1Q9H6L5 497 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 CCSER2Q9H7U1 834 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 SFXN1Q9H9B4 322 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.71□□□□□ -0.69
MDC1-205ENST00000425072 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 RASAL2Q9UJF2 1139 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 NUDT5Q9UKK9 219 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 ZNF510Q9Y2H8 683 aa10.71□□□□□ -0.69
MDC1-205ENST00000425072 MYO16Q9Y6X6 1858 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 TRAV19A0A0A6YYK7 116 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 EFCAB8A8MWE9 144 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 PI4K2BG5E9Z4 385 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 STK25O00506 426 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 COCHO43405 550 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 RFPL2O75678 378 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 MBL2P11226 248 aaPredicted RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 CDKN2BP42772 138 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 NR2C2P49116 596 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ARSEP51690 589 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ATXN1P54253 815 aaKnown RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 NRG1Q02297 640 aaPredicted RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 LMNB2Q03252 620 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 KCNC3Q14003 757 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 CCNG2Q16589 344 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 GLE1Q53GS7 698 aaKnown RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 ANKRD20A8PQ5CZ79 823 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 PPP6R3Q5H9R7 873 aaPredicted RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 TXNRD3NBQ6F5E7 133 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 MAATS1Q7Z4T9 603 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ADGRD2Q7Z7M1 963 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 MIB1Q86YT6 1006 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 CCDC185Q8N715 623 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 SMG7Q92540 1137 aaKnown RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 RNF157Q96PX1 679 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 PEBP4Q96S96 227 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ZNF670Q9BS34 389 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 RNF38Q9H0F5 515 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 TASP1Q9H6P5 420 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 ZNF334Q9HCZ1 680 aaPredicted RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 DNMT3BQ9UBC3 853 aaKnown RBP10.7□□□□□ -0.7
MDC1-205ENST00000425072 EYSQ5T1H1 3165 aa10.7□□□□□ -0.7
MDC1-205ENST00000425072 PRUNE2Q8WUY3 3088 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 DENND4CQ5VZ89 1909 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 ANAPC1Q9H1A4 1944 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 hCG_1818297A0A087WSY0 165 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 EPOPA6NHQ4 379 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 C3orf70A6NLC5 250 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 EEF2KO00418 725 aaKnown RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 CST8O60676 142 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 PAGE1O75459 146 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 ZNF189O75820 626 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 LATS1O95835 1130 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 OAS1P00973 400 aaKnown RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 IGLV3-27P01718 113 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 RHOP08100 348 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 IL4RP24394 825 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 SLC7A9P82251 487 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 ADAM15Q13444 863 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 RAB6CQ53S08 254 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 ATAT1Q5SQI0 421 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 ZNF697Q5TEC3 545 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 DCAF12L1Q5VU92 463 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 OTUD1Q5VV17 481 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 KAZNQ674X7 775 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 TXNDC8Q6A555 127 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 CYP4V2Q6ZWL3 525 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 GAREM2Q75VX8 874 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 TMEM150AQ86TG1 271 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 DDX42Q86XP3 938 aaKnown RBP eCLIP10.69□□□□□ -0.7
MDC1-205ENST00000425072 RFX6Q8HWS3 928 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 TMC8Q8IU68 726 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 MAB21L3Q8N8X9 362 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 VN1R2Q8NFZ6 395 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 UBXN4Q92575 508 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 FCRL2Q96LA5 508 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 KLF16Q9BXK1 252 aaPredicted RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 SIK2Q9H0K1 926 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms