RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SLC2A11Q9BYW1 496 aa18.63■□□□□ 0.57
IGHV3-47-201ENST00000425060 IRX2Q9BZI1 471 aaPredicted RBP18.63■□□□□ 0.57
IGHV3-47-201ENST00000425060 NLRC4Q9NPP4 1024 aa18.63■□□□□ 0.57
IGHV3-47-201ENST00000425060 NOCTQ9UK39 431 aaKnown RBP18.63■□□□□ 0.57
IGHV3-47-201ENST00000425060 EML5Q05BV3 1969 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 GVINP1Q7Z2Y8 2422 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 CAPN9O14815 690 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 AXIN1O15169 862 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 IRAK2O43187 625 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TSPAN3O60637 253 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TRUB2O95900 331 aaKnown RBP18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 HOXD9P28356 352 aaPredicted RBP18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLC6A4P31645 630 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 SOX5P35711 763 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZNF165P49910 485 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 DGKEP52429 567 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLC6A3Q01959 620 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 SIM2Q14190 667 aaPredicted RBP18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 PIK3R6Q5UE93 754 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 EGFLAMQ63HQ2 1017 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 OR6B2Q6IFH4 312 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZNF677Q86XU0 584 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 DEFB106AQ8N104 65 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 DCLK2Q8N568 766 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZNF397Q8NF99 534 aaPredicted RBP18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TSTD1Q8NFU3 115 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 DDI1Q8WTU0 396 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 GAB3Q8WWW8 586 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TMA16Q96EY4 203 aaKnown RBP18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 ACOX2Q99424 681 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 CEP83Q9Y592 693 aa18.62■□□□□ 0.57
IGHV3-47-201ENST00000425060 TEX33O43247 280 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 HSF2BPO75031 334 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 GFPT2O94808 682 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 MMEP08473 750 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 CHRNB2P17787 502 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLC11A2P49281 568 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 SGSHP51688 502 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 SNX16P57768 344 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 GEN1Q17RS7 908 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 DCAF6Q58WW2 860 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLC26A9Q7LBE3 791 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZDHHC17Q8IUH5 632 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 NEK11Q8NG66 645 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLC20A1Q8WUM9 679 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 CD248Q9HCU0 757 aa18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 RTN4Q9NQC3 1192 aaKnown RBP18.61■□□□□ 0.57
IGHV3-47-201ENST00000425060 WDR87Q6ZQQ6 2873 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZNF292O60281 2723 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 SYCE3A1L190 88 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 GRAP2O75791 330 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 RPP40O75818 363 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 LSM8O95777 96 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 CYP1A1P04798 512 aaPredicted RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 NTSR1P30989 418 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 STAT1P42224 750 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 NOMO3P69849 1222 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 FMO1Q01740 532 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 CDR2Q01850 454 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 ZC3H12AQ5D1E8 599 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 MPP7Q5T2T1 576 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 RFWD3Q6PCD5 774 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 TRMT11Q7Z4G4 463 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 KIAA0907Q7Z7F0 614 aaPredicted RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 MDGA1Q8NFP4 955 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 IPO4Q8TEX9 1081 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 C18orf8Q96DM3 657 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 GABRG3Q99928 467 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 XPO7Q9UIA9 1087 aaKnown RBP18.6■□□□□ 0.57
IGHV3-47-201ENST00000425060 A0A1W2PQF6 199 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 KCNU1A8MYU2 1149 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 DAB1O75553 588 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 TGM1P22735 817 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 SCNN1AP37088 669 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 CDK17Q00537 523 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 ENPP2Q13822 863 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 LPAL2Q16609 132 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 TMEM215Q68D42 235 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 LAIR1Q6GTX8 287 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 ANO7Q6IWH7 933 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 PRR23BQ6ZRT6 265 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 ERICH1Q86X53 443 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 XYLT1Q86Y38 959 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 OLIG1Q8TAK6 271 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 MYEOVQ96EZ4 313 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 PRICKLE1Q96MT3 831 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 SPAG5Q96R06 1193 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 ADAM33Q9BZ11 813 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 POLMQ9NP87 494 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 THAP10Q9P2Z0 257 aaPredicted RBP18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 FRYLO94915 3013 aa18.59■□□□□ 0.57
IGHV3-47-201ENST00000425060 PTMSP20962 102 aa18.58■□□□□ 0.56
IGHV3-47-201ENST00000425060 HLA-FP30511 346 aa18.58■□□□□ 0.56
IGHV3-47-201ENST00000425060 NOS2P35228 1153 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms