RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 LHX5Q9H2C1 402 aa16.91■□□□□ 0.3
PUDP-203ENST00000424830 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
PUDP-203ENST00000424830 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
PUDP-203ENST00000424830 FRMD4BQ9Y2L6 1034 aa16.91■□□□□ 0.3
PUDP-203ENST00000424830 USP3Q9Y6I4 520 aa16.91■□□□□ 0.3
PUDP-203ENST00000424830 TMEM131Q92545 1883 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 NUMA1Q14980 2115 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 TRABD2BA6NFA1 517 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 TNFSF14O43557 240 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 NR3C1P04150 777 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 CD58P19256 250 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 CCT8P50990 548 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 CYP4F3Q08477 520 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 INAVAQ3KP66 663 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 CEP135Q66GS9 1140 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 SCUBE3Q8IX30 993 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 CCDC150Q8NCX0 1101 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 MARCH2Q9P0N8 246 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 BTBD3Q9Y2F9 522 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.9■□□□□ 0.3
PUDP-203ENST00000424830 SNX11Q9Y5W9 270 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 KALRNO60229 2985 aa16.9■□□□□ 0.3
PUDP-203ENST00000424830 FLNBO75369 2602 aaKnown RBP16.9■□□□□ 0.3
PUDP-203ENST00000424830 PDXKO00764 312 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 GRIA4P48058 902 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 FNDC3BQ53EP0 1204 aaKnown RBP16.89■□□□□ 0.29
PUDP-203ENST00000424830 CCDC157Q569K6 752 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
PUDP-203ENST00000424830 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
PUDP-203ENST00000424830 IGSF8Q969P0 613 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 PLD4Q96BZ4 506 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 BBC3Q96PG8 261 aaPredicted RBP16.89■□□□□ 0.29
PUDP-203ENST00000424830 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 C6orf106Q9H6K1 298 aaPredicted RBP16.89■□□□□ 0.29
PUDP-203ENST00000424830 OSGEPQ9NPF4 335 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 CLEC4EQ9ULY5 219 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 ANKRD6Q9Y2G4 727 aa16.89■□□□□ 0.29
PUDP-203ENST00000424830 ASXL3Q9C0F0 2248 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 A0A087WV48 116 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 SLC12A8A0AV02 714 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 SEMA4FO95754 770 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 HLA-EP13747 358 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 ACSL1P33121 698 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 STK4Q13043 487 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 CAMK2GQ13555 558 aaPredicted RBP16.88■□□□□ 0.29
PUDP-203ENST00000424830 PPP1R26Q5T8A7 1209 aaPredicted RBP16.88■□□□□ 0.29
PUDP-203ENST00000424830 ADAT2Q7Z6V5 191 aaKnown RBP16.88■□□□□ 0.29
PUDP-203ENST00000424830 MARCH9Q86YJ5 346 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 KIAA0895Q8NCT3 520 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 BTBD1Q9H0C5 482 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 KCTD10Q9H3F6 313 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 FBRSQ9HAH7 460 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 TM9SF3Q9HD45 589 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 SLCO1B1Q9Y6L6 691 aa16.88■□□□□ 0.29
PUDP-203ENST00000424830 FAM149AA5PLN7 773 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
PUDP-203ENST00000424830 PCDHGA12O60330 932 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 DNTTP04053 509 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
PUDP-203ENST00000424830 VAMP7P51809 220 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 BCAT1P54687 386 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 SLC8A3P57103 927 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 ZNF445P59923 1031 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 YWHAGP61981 247 aaKnown RBP eCLIP16.87■□□□□ 0.29
PUDP-203ENST00000424830 ZBTB16Q05516 673 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 SMAD1Q15797 465 aaKnown RBP16.87■□□□□ 0.29
PUDP-203ENST00000424830 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
PUDP-203ENST00000424830 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 TMEM215Q68D42 235 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 WFIKKN2Q8TEU8 576 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
PUDP-203ENST00000424830 FTSJ1Q9UET6 329 aa16.87■□□□□ 0.29
PUDP-203ENST00000424830 E9PAM4 449 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 FSBPO95073 299 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 CD27P26842 260 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 ABCG1P45844 678 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 ME1P48163 572 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 PDE4CQ08493 712 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 CAMK2BQ13554 666 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 PTPRNQ16849 979 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 ZNF394Q53GI3 561 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
PUDP-203ENST00000424830 GRAMD1CQ8IYS0 662 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 TAS1R2Q8TE23 839 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 BIRC7Q96CA5 298 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
PUDP-203ENST00000424830 ARID3AQ99856 593 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 UBXN6Q9BZV1 441 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 TMEM245Q9H330 911 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 KNTC1P50748 2209 aa16.86■□□□□ 0.29
PUDP-203ENST00000424830 MUC22E2RYF6 1773 aaPredicted RBP16.85■□□□□ 0.29
PUDP-203ENST00000424830 MAPK13O15264 365 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms