RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ZNF419Q96HQ0 510 aaPredicted RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 LRRC4Q9HBW1 653 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 CNGB3Q9NQW8 809 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 SAMSN1Q9NSI8 373 aaKnown RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 CACNA2D2Q9NY47 1150 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 CNTN6Q9UQ52 1028 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 HBS1LQ9Y450 684 aaKnown RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 MAP1BP46821 2468 aaKnown RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 ZNF217O75362 1048 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 HMBSP08397 361 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 SETSIPP0DME0 302 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 ITPKAP23677 461 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 DPP6P42658 865 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 DAOAP59103 153 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 TRIM61Q5EBN2 209 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 TMEM215Q68D42 235 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 PMF1Q6P1K2 205 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 TMEM270Q6UE05 265 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 SLC41A1Q8IVJ1 513 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 FAM114A1Q8IWE2 563 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 KAT5Q92993 513 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 TMEM9BQ9NQ34 198 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 ABCC13Q9NSE7 274 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 OLA1Q9NTK5 396 aaKnown RBP16.89■□□□□ 0.29
DDR1-234ENST00000424544 HESX1Q9UBX0 185 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 STRIP2Q9ULQ0 834 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 RAD54BQ9Y620 910 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 STON1Q9Y6Q2 735 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 ZFHX4Q86UP3 3567 aa16.89■□□□□ 0.29
DDR1-234ENST00000424544 CEP192Q8TEP8 1941 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 AP5Z1O43299 807 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 CD19P15391 556 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
DDR1-234ENST00000424544 CSRP1P21291 193 aaKnown RBP16.88■□□□□ 0.29
DDR1-234ENST00000424544 IL12RB1P42701 662 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 ADIGQ0VDE8 80 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 DAB2IPQ5VWQ8 1189 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 LYSMD4Q5XG99 296 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 RSRC2Q7L4I2 434 aaKnown RBP16.88■□□□□ 0.29
DDR1-234ENST00000424544 KIAA0907Q7Z7F0 614 aaPredicted RBP16.88■□□□□ 0.29
DDR1-234ENST00000424544 IRF2BP1Q8IU81 584 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 CREBRFQ8IUR6 639 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 TRIM59Q8IWR1 403 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 HSFY1Q96LI6 401 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 NT5C1BQ96P26 610 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 CAPN10Q9HC96 672 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 ITM2CQ9NQX7 267 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 ELOVL2Q9NXB9 296 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 SFMBT1Q9UHJ3 866 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
DDR1-234ENST00000424544 GIPC1O14908 333 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 TIMM44O43615 452 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 LATS1O95835 1130 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 IGLV3-27P01718 113 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 GCNT1Q02742 428 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 RPL6Q02878 288 aaKnown RBP16.87■□□□□ 0.29
DDR1-234ENST00000424544 LMAN2Q12907 356 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 CDKAL1Q5VV42 579 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 IRGQQ8WZA9 623 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 MKRN2Q9H000 416 aaKnown RBP16.87■□□□□ 0.29
DDR1-234ENST00000424544 SLC6A17Q9H1V8 727 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 CD93Q9NPY3 652 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDR1-234ENST00000424544 CEP295Q9C0D2 2601 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 CACNA1EQ15878 2313 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 SPEGQ15772 3267 aa16.87■□□□□ 0.29
DDR1-234ENST00000424544 UPK3BL1B0FP48 263 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 UPK3BL2E5RIL1 263 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 FYNP06241 537 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 CEACAM1P13688 526 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 ZNF18P17022 549 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 ENGP17813 658 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 HARS2P49590 506 aaKnown RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 KCNH2Q12809 1159 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 EIF4HQ15056 248 aaKnown RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 STILQ15468 1287 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 DUOXA1Q1HG43 343 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 FUT11Q495W5 492 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 HSP90AA4PQ58FG1 418 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 PSAPL1Q6NUJ1 521 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 CEP76Q8TAP6 659 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 DDI1Q8WTU0 396 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 EDEM1Q92611 657 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 AZIN2Q96A70 460 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 NUSAP1Q9BXS6 441 aaKnown RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 HSD3B7Q9H2F3 369 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 USP36Q9P275 1121 aaKnown RBP16.86■□□□□ 0.29
DDR1-234ENST00000424544 SLC6A14Q9UN76 642 aa16.86■□□□□ 0.29
DDR1-234ENST00000424544 PCDHB4Q9Y5E5 795 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms