RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 C7orf25Q9BPX7 421 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 ORAI3Q9BRQ5 295 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 BTBD1Q9H0C5 482 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 FTSJ1Q9UET6 329 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 TMEM131Q92545 1883 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 A0A1B0GTQ1 180 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 TLX3O43711 291 aaPredicted RBP17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 STX6O43752 255 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 SEMA4FO95754 770 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 C1SP09871 688 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 PLA2G2AP14555 144 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 JUPP14923 745 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 RTP5Q14D33 572 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 ZACNQ401N2 412 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 CCDC157Q569K6 752 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 TMEM174Q8WUU8 243 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 USP28Q96RU2 1077 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 FBRSQ9HAH7 460 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 RAI2Q9Y5P3 530 aa17.54■□□□□ 0.4
CHCHD3-202ENST00000423635 VILLO15195 856 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 NEFLP07196 543 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 PDCP20941 246 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 HNF1BP35680 557 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 ASPAP45381 313 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 ARID5AQ03989 594 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 INCA1Q0VD86 236 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 KNOP1Q1ED39 458 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 ZNF605Q86T29 641 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 DENND1CQ8IV53 801 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 ZNF843Q8N446 348 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 DDI1Q8WTU0 396 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 NRSN2Q9GZP1 204 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 SGK2Q9HBY8 427 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 RASAL2Q9UJF2 1139 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 PLA2G4CQ9UP65 541 aa17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 COL5A1P20908 1838 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-202ENST00000423635 RRP8O43159 456 aaKnown RBP17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 CLSTN1O94985 981 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 FSBPO95073 299 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 ASS1P00966 412 aaKnown RBP17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 BCAT1P54687 386 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 RPS14P62263 151 aaKnown RBP17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 RACK1P63244 317 aaKnown RBP17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 EFEMP1Q12805 493 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 LAYNQ6UX15 382 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 DUSP16Q9BY84 665 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 PRSS16Q9NQE7 514 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 DMAC2Q9NW81 257 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 PTPRQQ9UMZ3 2332 aa17.52■□□□□ 0.4
CHCHD3-202ENST00000423635 CFAP46Q8IYW2 2715 aa17.52■□□□□ 0.39
CHCHD3-202ENST00000423635 ENC1O14682 589 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 HMBSP08397 361 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 HLA-FP30511 346 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 DLG4P78352 724 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 IL9RQ01113 521 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 SEMG2Q02383 582 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 MPPE1Q53F39 396 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 SV2AQ7L0J3 742 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 ADAT2Q7Z6V5 191 aaKnown RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 KIAA0907Q7Z7F0 614 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 SLC9A9Q8IVB4 645 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 SNIP1Q8TAD8 396 aaKnown RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 FCRL3Q96P31 734 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 ELF4Q99607 663 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 NT5C1AQ9BXI3 368 aa17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 ACE2Q9BYF1 805 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-202ENST00000423635 TEX51A0A1B0GUA7 166 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 CAPN9O14815 690 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 IKBKBO14920 756 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 RFPL3O75679 317 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 LDOC1O95751 146 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 DNTTP04053 509 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 IGHV4-34P06331 123 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 HOXD9P28356 352 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 TARDBPQ13148 414 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■□ 23.4
CHCHD3-202ENST00000423635 CUL4AQ13619 759 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 SPOPLQ6IQ16 392 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 GPR155Q7Z3F1 870 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 ADIPOR2Q86V24 386 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 CACTIN-AS1Q8N1I8 211 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 WFIKKN2Q8TEU8 576 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 BAP1Q92560 729 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 TSC1Q92574 1164 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 GOLGA1Q92805 767 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 DHX58Q96C10 678 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 CNDP2Q96KP4 475 aaKnown RBP17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 UBXN6Q9BZV1 441 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 MARCH2Q9P0N8 246 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 AK5Q9Y6K8 562 aa17.5■□□□□ 0.39
CHCHD3-202ENST00000423635 PVALEFA0A1B0GWK0 134 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms