RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TMEFF1Q8IYR6 380 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 MRGPRX1Q96LB2 322 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 CRACR2AQ9BSW2 395 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 AJAP1Q9UKB5 411 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-206ENST00000420121 STON1Q9Y6Q2 735 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 KMT2BQ9UMN6 2715 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 TSPAN3O60637 253 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 LATS1O95835 1130 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 ADRB1P08588 477 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SLC9A1P19634 815 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 HLA-FP30511 346 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SLC6A4P31645 630 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 MEA1Q16626 185 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 FAM133BQ5BKY9 247 aaKnown RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SPDYCQ5MJ68 293 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 NADSYN1Q6IA69 706 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 LPCAT2Q7L5N7 544 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 CYP2U1Q7Z449 544 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 ANKS1BQ7Z6G8 1248 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 WFDC5Q8TCV5 224 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 RNF139Q8WU17 664 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF606Q8WXB4 792 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 MYEOVQ96EZ4 313 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SPACA7Q96KW9 195 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 EDEM2Q9BV94 578 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SLC4A5Q9BY07 1137 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 MKRN2Q9H000 416 aaKnown RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 SIX2Q9NPC8 291 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-206ENST00000420121 ELOVL2Q9NXB9 296 aa11.51□□□□□ -0.57
SSBP3-206ENST00000420121 GOLGA6L7A0A1B0GV03 622 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 FBXO21O94952 628 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 KRT5P13647 590 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 ITPKAP23677 461 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 PRKCHP24723 683 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 COPAP53621 1224 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 IRX4P78413 519 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 RING1Q06587 406 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF234Q14588 700 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 FUT11Q495W5 492 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 MPPE1Q53F39 396 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 ADGRF1Q5T601 910 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 WDTC1Q8N5D0 677 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 DQX1Q8TE96 717 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 DDI1Q8WTU0 396 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 SHC3Q92529 594 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 PIGKQ92643 395 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 SLC39A13Q96H72 371 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 LMLNQ96KR4 655 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 FCRL2Q96LA5 508 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 LSM14BQ9BX40 385 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 MIS12Q9H081 205 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 RYDENQ9NUL5 291 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 TJP2Q9UDY2 1190 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 PILRBQ9UKJ0 227 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 CYP8B1Q9UNU6 501 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
SSBP3-206ENST00000420121 CEP295Q9C0D2 2601 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 PCNX2A6NKB5 2137 aa11.5□□□□□ -0.57
SSBP3-206ENST00000420121 GTPBP10A4D1E9 387 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 C4orf47A7E2U8 309 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 E5RJQ4 531 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 KHNYNO15037 678 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 NPC1O15118 1278 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 MAP3K13O43283 966 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 ACSL4O60488 711 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 FGFR1OPO95684 399 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 IGLV3-25P01717 112 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 CYBBP04839 570 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 C7P10643 843 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 PYGBP11216 843 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 NCAM1P13591 858 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 PON1P27169 355 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF445P59923 1031 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 PITX1P78337 314 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 EIF4EBP2Q13542 120 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 BYSLQ13895 437 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 EIF4HQ15056 248 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 SYPL2Q5VXT5 272 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms