RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TM4SF4P48230 202 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SCNN1GP51170 649 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SLC6A3Q01959 620 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 KBTBD12Q3ZCT8 623 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 C11orf63Q6NUN7 778 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 FBXO36Q8NEA4 188 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 PPP1R16AQ96I34 528 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SMARCAL1Q9NZC9 954 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MARCOQ9UEW3 520 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 TRHDEQ9UKU6 1024 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CNTNAP1P78357 1384 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 ENO3P13929 434 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 CRYBB1P53674 252 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 SLC12A3P55017 1021 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CHI3L2Q15782 390 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CCNG2Q16589 344 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CCDC3Q9BQI4 270 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ILKAPQ9H0C8 392 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 RUVBL2Q9Y230 463 aaKnown RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 KRT87PA6NCN2 255 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 EML1O00423 815 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PPP1R37O75864 691 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 GJB1P08034 283 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 NR2C2P49116 596 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 POLR2LP62875 67 aaKnown RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 GUCY1A3Q02108 690 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 ACAP1Q15027 740 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBR4-206ENST00000419533 COLGALT1Q8NBJ5 622 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 COPS5Q92905 334 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 RMND5AQ9H871 391 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 H2AFY2Q9P0M6 372 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 COL2A1P02458 1487 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 SUPT7LO94864 414 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ADH1AP07327 375 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 BDNFP23560 247 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 C7orf61Q8IZ16 206 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 KIAA0895Q8NCT3 520 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 SUSD6Q92537 303 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 KLF6Q99612 283 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 NLNQ9BYT8 704 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 GANQ9H2C0 597 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 L2HGDHQ9H9P8 463 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ASAH2Q9NR71 780 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 SFMBT1Q9UHJ3 866 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PGAP2Q9UHJ9 254 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 TMEM120BA0PK00 339 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 MYO1GB0I1T2 1018 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PSMD10O75832 226 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 LTFP02788 710 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ATP5C1P36542 298 aaKnown RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 NFIL3Q16649 462 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 USP41Q3LFD5 358 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 ZNF571Q7Z3V5 609 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 C18orf25Q96B23 403 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 LENG9Q96B70 501 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PNKPQ96T60 521 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 USP15Q9Y4E8 981 aaPredicted RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 CYP3A7-CYP3A51PA0A087WV96 503 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 SPATA31C2B4DYI2 1134 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 FAM47E-STBD1D6RA91 191 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 EIF3HO15372 352 aaKnown RBP eCLIP8.67□□□□□ -1.026e-12■■■■■ 40.3
UBR4-206ENST00000419533 RPN2P04844 631 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PRLRP16471 622 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CYP3A7P24462 503 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 RPL9P32969 192 aaKnown RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 PSEN1P49768 467 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CDH17Q12864 832 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 DDX39BQ13838 428 aaKnown RBP8.67□□□□□ -1.02
UBR4-206ENST00000419533 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 HORMAD1Q86X24 394 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 PALB2Q86YC2 1186 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 DEFB106AQ8N104 65 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 SGF29Q96ES7 293 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 EPN3Q9H201 632 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 CDH9Q9ULB4 789 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
UBR4-206ENST00000419533 HACD1B0YJ81 288 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 F8W810 466 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
UBR4-206ENST00000419533 CYP2A7P20853 494 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 PRIM2P49643 509 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CCL23P55773 120 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 CORO7P57737 925 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 BCL2L1Q07817 233 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 MTM1Q13496 603 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 DMC1Q14565 340 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 SLC45A4Q5BKX6 768 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 DLK2Q6UY11 383 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 TFAP2DQ7Z6R9 452 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 BBS7Q8IWZ6 715 aa8.66□□□□□ -1.02
UBR4-206ENST00000419533 ATG4AQ8WYN0 398 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms