RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PRR23BQ6ZRT6 265 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 FAM183BPQ6ZVS7 135 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 TRMT11Q7Z4G4 463 aaKnown RBP21.14■□□□□ 0.97
GTF3A-202ENST00000419181 NOP9Q86U38 636 aaKnown RBP21.14■□□□□ 0.97
GTF3A-202ENST00000419181 RASSF3Q86WH2 238 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 DHX40Q8IX18 779 aaKnown RBP21.14■□□□□ 0.97
GTF3A-202ENST00000419181 TMEM35BQ8NCS4 154 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 DDI1Q8WTU0 396 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 AZIN2Q96A70 460 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 SLC2A13Q96QE2 648 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 ERGIC2Q96RQ1 377 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 RAB23Q9ULC3 237 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 CLEC4EQ9ULY5 219 aa21.14■□□□□ 0.97
GTF3A-202ENST00000419181 IRAK2O43187 625 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 ACSL4O60488 711 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 HSF2BPO75031 334 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 RPP40O75818 363 aaKnown RBP21.13■□□□□ 0.97
GTF3A-202ENST00000419181 SLC11A2P49281 568 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 UBXN1Q04323 297 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 LPAL2Q16609 132 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 FAM133BQ5BKY9 247 aaKnown RBP21.13■□□□□ 0.97
GTF3A-202ENST00000419181 EFHC1Q5JVL4 640 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 TAF3Q5VWG9 929 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 EGFLAMQ63HQ2 1017 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 LAIR1Q6GTX8 287 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 KIAA2013Q8IYS2 634 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 DCLK2Q8N568 766 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 IPO4Q8TEX9 1081 aaKnown RBP21.13■□□□□ 0.97
GTF3A-202ENST00000419181 SLC2A11Q9BYW1 496 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 IRX2Q9BZI1 471 aaPredicted RBP21.13■□□□□ 0.97
GTF3A-202ENST00000419181 PDCL3Q9H2J4 239 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 NLRC4Q9NPP4 1024 aa21.13■□□□□ 0.97
GTF3A-202ENST00000419181 TSPAN3O60637 253 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 GFPT2O94808 682 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 LSM8O95777 96 aaKnown RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 TRUB2O95900 331 aaKnown RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 SLC6A4P31645 630 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 SOX5P35711 763 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 PITX1P78337 314 aaPredicted RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 EIF4EBP2Q13542 120 aaPredicted RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 GEN1Q17RS7 908 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 DCAF6Q58WW2 860 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 RNF43Q68DV7 783 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 NADSYN1Q6IA69 706 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 OR6B2Q6IFH4 312 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 ANO7Q6IWH7 933 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 CEP68Q76N32 757 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 SLC26A9Q7LBE3 791 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 MDGA1Q8NFP4 955 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 TMA16Q96EY4 203 aaKnown RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 SYNCQ9H7C4 482 aa21.12■□□□□ 0.97
GTF3A-202ENST00000419181 NOCTQ9UK39 431 aaKnown RBP21.12■□□□□ 0.97
GTF3A-202ENST00000419181 MMEP08473 750 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 NTSR1P30989 418 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ZNF165P49910 485 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 SGSHP51688 502 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 SLC6A3Q01959 620 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 PIK3R6Q5UE93 754 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 RFWD3Q6PCD5 774 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ANKS1BQ7Z6G8 1248 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ZNF677Q86XU0 584 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ZDHHC17Q8IUH5 632 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 DEFB106AQ8N104 65 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ZNF397Q8NF99 534 aaPredicted RBP21.11■□□□□ 0.97
GTF3A-202ENST00000419181 NEK11Q8NG66 645 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 SPAG5Q96R06 1193 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 ACOX2Q99424 681 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 POLMQ9NP87 494 aaPredicted RBP21.11■□□□□ 0.97
GTF3A-202ENST00000419181 SPTBN4Q9H254 2564 aa21.11■□□□□ 0.97
GTF3A-202ENST00000419181 GOLGA6L7A0A1B0GV03 622 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 SMTNL1A8MU46 457 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 DAB1O75553 588 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 GRAP2O75791 330 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 ALDH1A2O94788 518 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 GABRB2P47870 512 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 MPP7Q5T2T1 576 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 CHPFQ8IZ52 775 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 SLC20A1Q8WUM9 679 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
GTF3A-202ENST00000419181 GABRG3Q99928 467 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 TPSD1Q9BZJ3 242 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 GMEB2Q9UKD1 530 aa21.1■□□□□ 0.97
GTF3A-202ENST00000419181 SDK1Q7Z5N4 2213 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 A0A1W2PQF6 199 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 SYCE3A1L190 88 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 APOEP02649 317 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 HOXB2P14652 356 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 HLA-FP30511 346 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 STAT1P42224 750 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 WASP42768 502 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 NOMO3P69849 1222 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 CDK17Q00537 523 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 CDR2Q01850 454 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 EIF4HQ15056 248 aaKnown RBP21.09■□□□□ 0.97
GTF3A-202ENST00000419181 ZC3H12AQ5D1E8 599 aaKnown RBP21.09■□□□□ 0.97
GTF3A-202ENST00000419181 CACNA2D4Q7Z3S7 1137 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.09■□□□□ 0.97
GTF3A-202ENST00000419181 FAM160A2Q8N612 972 aaPredicted RBP21.09■□□□□ 0.97
GTF3A-202ENST00000419181 C18orf8Q96DM3 657 aa21.09■□□□□ 0.97
GTF3A-202ENST00000419181 PRICKLE1Q96MT3 831 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms