RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 KDELR1P24390 212 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PGGT1BP53609 377 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 NR1H2P55055 460 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 CCNIQ14094 377 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 KDELC2Q7Z4H8 507 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 CMC1Q7Z7K0 106 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 MCUQ8NE86 351 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PDZD8Q8NEN9 1154 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 GRIN3AQ8TCU5 1115 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 CYGBQ8WWM9 190 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 TBC1D22BQ9NU19 505 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 V9GYQ6 96 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SAC3D1A6NKF1 404 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SIN3BO75182 1162 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 AMHP03971 560 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 MAP4P27816 1152 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 NUMBP49757 651 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PRKCEQ02156 737 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SPP2Q13103 211 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 GPR107Q5VW38 600 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 TMEM214Q6NUQ4 689 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 FRMD7Q6ZUT3 714 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 CPNE9Q8IYJ1 553 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PRICKLE1Q96MT3 831 aaPredicted RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 STRIP2Q9ULQ0 834 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 ZNRF3Q9ULT6 936 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PLLPQ9Y342 182 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 WDR27A2RRH5 827 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 AKAP10O43572 662 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 EXTL3O43909 919 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 HALP42357 657 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 MAPK11Q15759 364 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 RAB6CQ53S08 254 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 C10orf107Q8IVU9 208 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 RAVER1Q8IY67 606 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 SLC7A5P1Q8MH63 180 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 C20orf27Q9GZN8 174 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 RAB6CQ9H0N0 254 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 AGO4Q9HCK5 861 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 PTPRJQ12913 1337 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 LDHAP00338 332 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 SERPINA6P08185 405 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 CSH1P0DML2 217 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 CSH2P0DML3 217 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TFE3P19532 575 aaPredicted RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 EPHA3P29320 983 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 EEF1DP29692 281 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 TRAF2Q12933 501 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 RTKN2Q8IZC4 609 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 LRRC71Q8N4P6 559 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 PCDH20Q8N6Y1 951 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 DDI1Q8WTU0 396 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 SLC44A1Q8WWI5 657 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 ZNF512Q96ME7 567 aaPredicted RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 DRC3Q9H069 523 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 COQ6Q9Y2Z9 468 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 GLI3P10071 1580 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 LAMA2P24043 3122 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 SLC26A4O43511 780 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 GMNNO75496 209 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 CCNE2O96020 404 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TNNC2P02585 160 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 HMGCRP04035 888 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 ITGAVP06756 1048 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 AVPR1AP37288 418 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TTC33Q6PID6 262 aaPredicted RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 ZNF677Q86XU0 584 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 MPP5Q8N3R9 675 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 SMYD1Q8NB12 490 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TFAP2BQ92481 460 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 JADE3Q92613 823 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 MRPS26Q9BYN8 205 aaKnown RBP12.03□□□□□ -0.48
DDR1-232ENST00000418800 PCDH18Q9HCL0 1135 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 TIMMDC1Q9NPL8 285 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 THAP1Q9NVV9 213 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 SPATA7Q9P0W8 599 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
DDR1-232ENST00000418800 LRCH4O75427 683 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms